Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0782 ATGGCCATTAACCATGAAACTTGGGCTTTCATTTTCGGTCTTCTAGGCAACGTGATCTCCTTTATGGTGTTCCTTTCTCCATTACCAACTTTCTACCAAATCTACAAGAAGAAAACTGCAGAAGGGTTTCAAGCACTACCCTATGTTATTGCACTGTTCAGCTCAATGCTTTGGATCTATTACGCACTCGTCAAAAAGAATGCTAGCCTCCTTCTCATTACTATTAACTCCTTTGGATGTGTCATAGAGACAATTTACCTTACCATCTTCCTAGTTTACGCCCCAAGAAAAACCAGGCTTTCTACCATAAAGCTTCTTCTGGTGTTGAATGTGTTTGGATTCGGAGCGATGCTTCTTTCAACCCTCTACCTTACAACTGGTTACAAACGTCTTACTGTGATAGGATGGATTTGCCTTGTTTTGAACATAGGCGTATTTGCTGCTCCTCTTTGCATCATGAAACGTGTGATAAAGACGAAGAGCGTGGAGTTCATGCCTTTCACTTTGTCCTTCTCTTTGACCTTAAATGCTGTTATGTGGTTCTTCTATGGCCTTCTTCTCAAGGACTACTACATTGCACTCCCAAATACTCTTGGGTTTCTATTCGGCATAATCCAGATGGTGATGTATTTGATATATAGAAACGCAAAGCCACAAGCATTGGAGGAGCCAACTAAGGTTCAGATGGAACTAAGTGGCCATATTATTGACGTTATGAAGCCGAATCATGTTACCAAAAATGGTGCTGTGATTGAGACAGCAGCTACCAATGTGTGA 777 0.4131 MAINHETWAFIFGLLGNVISFMVFLSPLPTFYQIYKKKTAEGFQALPYVIALFSSMLWIYYALVKKNASLLLITINSFGCVIETIYLTIFLVYAPRKTRLSTIKLLLVLNVFGFGAMLLSTLYLTTGYKRLTVIGWICLVLNIGVFAAPLCIMKRVIKTKSVEFMPFTLSFSLTLNAVMWFFYGLLLKDYYIALPNTLGFLFGIIQMVMYLIYRNAKPQALEEPTKVQMELSGHIIDVMKPNHVTKNGAVIETAATNV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0782 258 PANTHER RAG1-ACTIVATING PROTEIN 1 4 250 - -
Aed10g0782 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Aed10g0782 258 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Aed10g0782 258 Gene3D - 11 98 - -
Aed10g0782 258 Gene3D - 128 224 - -
Aed10g0782 258 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0782 Aed-Chr10 6485935 6488554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0782 1 254 Miscellaneous Gene Families AT5G50800 53.937 4.00e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0782 K15382 - gmx:100810962 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0782 10 6485935 6488554 Aed10g0782 10 6485935 6488554 ECH
Aed5g2232 5 24317601 24320126 Aed10g0782 10 6485935 6488554 PCT