Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2231 ATGGCTCACGCCAATCCTATGATTTTTGTTGTTGGAATTCTAGGTAACCTGGTCTCCTTCTGTTGCTTTCTAGCACCAGTACCAACATTTTATCGAGTTTGTAAGAAGAAAACGACGGAAGGTTTCCAATCACTACCTTACGTGGCAGCACTCTTCACTTCAATGCTATGGATATTTTATGCATACATAAAGACGGGCGAAATACTTCTGATTACCATCAACGCATTCGGTTGTTTCATTGAGACTGTTTACCTTGTCATCTATATCATTTATTGCCCCAAGAAAGCTAGGTTTTTTACCTTCAAGATGATATTCTTGTTCAATATTGGGGTGATTTTCTTGGTGGTTCTTCTTACCCACGTTTTAGCAAAAGAACGAACAGCCCGTATTGAGCTTCTTGGATGGATTTGTGTTGTCCTTTCTACCAGTGTCTTTGCAGCACCTTTAAGCATTATTAAAGTGGTTATTCGCACAAAAAGTGTAGAGTTCATGCCTATTACTCTGTCAATCCTCCTCACAGTAAGTGCAGCGATGTGGATGGCCTACGGTATTCTCCTGAAGGACATCTACGTTACACTTCCGAACTTTGTGGGTATCACATTTGGAACAATTCAGATAGTGCTCTACTTAATATACAGAAAGCACACGCCCGCTAAGGATCAAAAGCAGCTTCCAGATGTTGTCAATGACGCCGCCAACGCAGCTGTGATCAGTGGTGAGAATCAGCAGGGAGCAATTAACACTGCTGGATTCGTTGATATTGAGATTGGAGATAAGAAGAAGCAAGTTCGTGAGGACCAAACAGAACACAACATCAACCATACAAACAAAACAAGGGAGGGTAATTAA 849 0.4134 MAHANPMIFVVGILGNLVSFCCFLAPVPTFYRVCKKKTTEGFQSLPYVAALFTSMLWIFYAYIKTGEILLITINAFGCFIETVYLVIYIIYCPKKARFFTFKMIFLFNIGVIFLVVLLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSILLTVSAAMWMAYGILLKDIYVTLPNFVGITFGTIQIVLYLIYRKHTPAKDQKQLPDVVNDAANAAVISGENQQGAINTAGFVDIEIGDKKKQVREDQTEHNINHTNKTREGN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2231 282 Gene3D - 8 98 - -
Aed5g2231 282 PANTHER RAG1-ACTIVATING PROTEIN 1 4 275 - -
Aed5g2231 282 Pfam Sugar efflux transporter for intercellular exchange 132 215 IPR004316 GO:0016021
Aed5g2231 282 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016021
Aed5g2231 282 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 275 - -
Aed5g2231 282 MobiDBLite consensus disorder prediction 260 282 - -
Aed5g2231 282 Gene3D - 128 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2231 Aed-Chr5 24309745 24311491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2231 5 276 Miscellaneous Gene Families AT5G23660 46.237 3.29e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2231 K15382 - gmx:100801430 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2231 5 24309745 24311491 Aed5g2231 5 24309745 24311491 ECH
Aed5g2231 5 24309745 24311491 Aed10g0781 10 6468244 6470706 PCT