Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0781 ATGTCTCACAGTCATTTAAGTTTCGCCTTTGGAATTCTAGGTAACATTGCCTCCTTCGTGTGCTTTCTGGCACCACTACCGACATTTTATAGAGTTTGTAAGAAGAAATCAACCGAAGGGTTCCAATCAGTTCCATATGTGGCTGCACTCTTCAGTGCAATGCTTTGGATCTTCTATGCCTATGTGAAGACCGGAGAAACGCTTCTTATCACCATCAATGTATTCGGTTGCGTGATTGAGACTATTTACCTTGCCATTTTTGTCACTTACTGCCCCAAGAAAGCTAGGGTACAGTACTATTTCAAACTAACTTTACTCATGCACTTTGATTCTGTTGTCCCTCATAATTACTTGAAAGTGTTTTTGAACTTGCAGATGTCAACATTGAGGATGATTGTTTTGTTAAACTTTGGTGGATTTTGCACGATTGTCCTCTTAACCCGCCTACTAGCAAAAGGAGAAGGCCGTGTCAAGCTTCTAGGATGGATTTGCGTAGTCTTTGCTACTAGTAGGGTGGTTATTAGGACGAAAAGCGTGGAGTTCCTTCCTTTCCCACTTTCACTTCTCCTTCTGATAAGCGCAATTCTGTGGCTGCTATACGGTATCTCCCTCAAGGATATCTATGTTACGCTCCCGAACGTTGTGGGGTTAGCATTTGGATTCATTCAGATCGGTCTCTATGCAATGTACAGAAACAACAAGCCCGTAAAGGATCAGAAGCTACCAGAACACAAAGGGGATGTTGTTGACAACGTTATCATTGCTGCTCCAACAGTGAATGCTAAGAATAATGAGAATCAAGAACAGGAAGAAAAGCCTCAGGGTGGAGTAGATATAGAGATTGGGGAGGAGAAGGAAGAACAAGATCAACAACCTCAACCTGAGAATAAGAAGCTTGACCAAGTTTCTCATGACCAAACGGAACTAGTACTTAACAACAATAATAACGACAACAAAACAGGGGAGAGGGTGATCAGTTGCCAAGTTTGA 990 0.4212 MSHSHLSFAFGILGNIASFVCFLAPLPTFYRVCKKKSTEGFQSVPYVAALFSAMLWIFYAYVKTGETLLITINVFGCVIETIYLAIFVTYCPKKARVQYYFKLTLLMHFDSVVPHNYLKVFLNLQMSTLRMIVLLNFGGFCTIVLLTRLLAKGEGRVKLLGWICVVFATSRVVIRTKSVEFLPFPLSLLLLISAILWLLYGISLKDIYVTLPNVVGLAFGFIQIGLYAMYRNNKPVKDQKLPEHKGDVVDNVIIAAPTVNAKNNENQEQEEKPQGGVDIEIGEEKEEQDQQPQPENKKLDQVSHDQTELVLNNNNNDNKTGERVISCQV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0781 329 Pfam Sugar efflux transporter for intercellular exchange 169 234 IPR004316 GO:0016021
Aed10g0781 329 Pfam Sugar efflux transporter for intercellular exchange 9 95 IPR004316 GO:0016021
Aed10g0781 329 Gene3D - 155 241 - -
Aed10g0781 329 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 111 - -
Aed10g0781 329 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 123 293 - -
Aed10g0781 329 PANTHER RAG1-ACTIVATING PROTEIN 1 123 293 - -
Aed10g0781 329 Gene3D - 9 94 - -
Aed10g0781 329 MobiDBLite consensus disorder prediction 260 329 - -
Aed10g0781 329 MobiDBLite consensus disorder prediction 265 304 - -
Aed10g0781 329 MobiDBLite consensus disorder prediction 305 329 - -
Aed10g0781 329 PANTHER RAG1-ACTIVATING PROTEIN 1 5 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0781 Aed-Chr10 6468244 6470706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0781 2 275 Miscellaneous Gene Families AT5G23660 45.515 4.63e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0781 K15382 - gmx:100810426 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2231 5 24309745 24311491 Aed10g0781 10 6468244 6470706 PCT