Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2230 ATGCTGCCGCCGCCGCCGCCGGAGAATCCAGATTCCGGCGTGGCCTCTGCTCCCTCGCTGGTCAGAACTTATCGCGTCTGGCAAGGCAGTAACGTATTTTTTTGTGGAGGGAGGCTTATATTTGGGCCTGATGTGAAATCTATATTTATATCGATTATTCTTGTTGTTCTCCCCGTGGCTCTGTTCTGCGGCATGGTAGCAAGGAAACTGTTAGATGATTTTCCTCGTCATACTGGATGGTCAATAATGGGCCTTGTTATTGCTTCCACACTCTTCGTTCTAATCACCCTTGTAGTGACATCAGCCAGAGATCCTGGCATAGTACCTCGTAATGCTCAGCCTCCAGACCCAGATGACTATCATTGGACTGAGAGTAGCAAAAGTGAACGACAAATTTCATTGTCACGATTTCCACGGACAAAGAATGTAACTGTGAATGGTATAACAATGAAAGTCAAATATTGTGATACTTGCATGCTCTACAGACCCCTCCGCGCTTCTCATTGTTCAGTCTGTGATAACTGTGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGCGAAATTACCGGTTCTACTACATGTTTGTTTTCTCTGCCACTCTGCTTTGCTTGTATATACATGCCTTTTGCTGGGTCTACATTATGAAGATCAAGCACTCCGAGGAAATATCAATTTGGAAAGCAATGACCAAAACTATACCATCCATCGCACTAATAGTCTACAGCTTTGTTTGTGTCTGGTTTGTTGGCGGTCTCACTGTTTTCCACACATACCTCATCAGCACAAATCAGTCTACTTCCGAAAATTATAAATACCGGTATGACCCACAAACCAACCCATATAATAGAGGGATAGTTAACAACTTCAAAGAAGTATTCTGCAGCAGAATTCCTCCATCCAAGAATAATTTCAGGTCTAAGGTTCCAAGGGAGCCATTAGATTCATATGGAAGAACGGGTATTAGGCCCTTATGCCCAATGATGAAAAGACGCAGCAGGAGTATGATAGAGTTAGTAGGGAATTCAGCATACAATGAGCAAGACGACGAGGAGAGTAATTATAGTCATAGAGATGGATTTGACAATCAAGCACGCAGCAAAGATAGTGGATTGACAGATAAGTCCCTGGATTTAAGCAGGATCCTTCACACAGAGGGACATGAAAGGTCACTTCAACACCATCTATGGGAAGCAACCCCAGAAGTTCAGGACAGCATAACAGAAGTTGGGAAATCAAATTACTCAACTAAAGAGGTTGTATAG 1281 0.4364 MLPPPPPENPDSGVASAPSLVRTYRVWQGSNVFFCGGRLIFGPDVKSIFISIILVVLPVALFCGMVARKLLDDFPRHTGWSIMGLVIASTLFVLITLVVTSARDPGIVPRNAQPPDPDDYHWTESSKSERQISLSRFPRTKNVTVNGITMKVKYCDTCMLYRPLRASHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYIHAFCWVYIMKIKHSEEISIWKAMTKTIPSIALIVYSFVCVWFVGGLTVFHTYLISTNQSTSENYKYRYDPQTNPYNRGIVNNFKEVFCSRIPPSKNNFRSKVPREPLDSYGRTGIRPLCPMMKRRSRSMIELVGNSAYNEQDDEESNYSHRDGFDNQARSKDSGLTDKSLDLSRILHTEGHERSLQHHLWEATPEVQDSITEVGKSNYSTKEVV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2230 426 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 15 422 - -
Aed5g2230 426 Pfam DHHC palmitoyltransferase 150 278 IPR001594 GO:0016409
Aed5g2230 426 ProSiteProfiles DHHC domain profile. 153 203 - -
Aed5g2230 426 MobiDBLite consensus disorder prediction 349 378 - -
Aed5g2230 426 PANTHER S-ACYLTRANSFERASE 15 422 - -
Aed5g2230 426 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2230 Aed-Chr5 24300903 24304284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2230 85 315 Lipid Metabolism Gene Families AT4G22750 27.711 1.17e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2230 - - gmx:100788304 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0780 10 6452547 6458698 Aed5g2230 5 24300903 24304284 ECH
Aed5g2230 5 24300903 24304284 Aed5g2230 5 24300903 24304284 ECH