Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0780 ATGTTTCCGGCACCGCCGCCTGCCGGAGATACGCCTCTGGTCAGAACTTACCGTGTTTGGAAAGGCAATAACGAATTTTGTCTTTGGGGGAGGCTTATATTTGGACCTGACGGGAAATCTATATTTTTGACAATCTTTCTTGTGGTTGCCCCTGTTGCTGTTTTCTCTGCTTTTGTGGCTAGGAAGCTGTTGGATGATTTTCCTCATCGCTGGGGATATTCAATACTGATCATAGTTATTCTTCACACAGTGTTTGTTCTGATCACCCTTCTACTGACCTCAGGAAGAGATCCTGGCATAGTGCCCCGTAATGCTCACCCTCCAATTCTGGATGATCAATATGATCATGGGATTGGGAATGGGAATGAACAAACCCCGCGGCCACCTTTTCCACGAGCAAAGCAAGTAATTGTCAATGGAGTTTCTGTGAAGATTAAATATTGTGACACTTGCATGCTTTATAGACCTCCCCGCTGTTCTCATTGCTCAGTGTGTGATAACTGTGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGCATTGGACTGCGAAATTATAGGTTCTACTACATGTTTGTTTTCTCAGCAACCCTTCTTTGTTTATATATTCATGCCTTTTGCTGGGTCTACATCAAGAGAATCATGAACTCAGAGGACATATCGATTTGGAAAGCAATGATCAAAACTCCTGCTTCCATTGCACTGATAATATACTCCTTCATTTCTGTCTGGTTTGTTGGAGGCCTCAGTGTTTTCCATGCATATCTAATCAGCAAAAACCAGTCTACTTATGAAAATTTTAGATACCGGTATGACCAACAAGTCAACCCTTATGACAAAGGAGTGGCTGCAAACTTTAGAGAAATATTTTGCTCTGGAATTCCTCCATCCAAGAACAACTTCAGGTCTAAGATTCCAATTCCAAAGGAACTATCAGATTCATCAAGAAGAAGGGCTATTGAATCTCTTACCCCTGTGATGAGAAAAAGAGTAAGAGAACTTGAACTAGGGACCATCCCAGTATTGTACAATGAATTTGAGGAAGAAGAGGAGGAGGAGGCAAGTGATCATGTAGATGAGTTTACCAATGATAGGGAACATGGAAAGGGTAGTGGAATAGGTGATACTATGCCTGTGGATTTGAGCAGGATGCTTCATACAGAAGGGGGGCAGAGAGAATTTGCTTCGTTTCTAAGGCAATAG 1209 0.4268 MFPAPPPAGDTPLVRTYRVWKGNNEFCLWGRLIFGPDGKSIFLTIFLVVAPVAVFSAFVARKLLDDFPHRWGYSILIIVILHTVFVLITLLLTSGRDPGIVPRNAHPPILDDQYDHGIGNGNEQTPRPPFPRAKQVIVNGVSVKIKYCDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYIHAFCWVYIKRIMNSEDISIWKAMIKTPASIALIIYSFISVWFVGGLSVFHAYLISKNQSTYENFRYRYDQQVNPYDKGVAANFREIFCSGIPPSKNNFRSKIPIPKELSDSSRRRAIESLTPVMRKRVRELELGTIPVLYNEFEEEEEEEASDHVDEFTNDREHGKGSGIGDTMPVDLSRMLHTEGGQREFASFLRQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0780 402 PANTHER S-ACYLTRANSFERASE 10 393 - -
Aed10g0780 402 Pfam DHHC palmitoyltransferase 145 270 IPR001594 GO:0016409
Aed10g0780 402 ProSiteProfiles DHHC domain profile. 146 196 - -
Aed10g0780 402 Coils Coil 346 366 - -
Aed10g0780 402 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 10 393 - -
Aed10g0780 402 MobiDBLite consensus disorder prediction 349 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0780 Aed-Chr10 6452547 6458698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0780 74 321 Lipid Metabolism Gene Families AT4G22750 27.675 3.87e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0780 - - gmx:100791866 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0780 10 6452547 6458698 Aed5g2230 5 24300903 24304284 ECH
Aed10g0780 10 6452547 6458698 Aed10g0780 10 6452547 6458698 ECH