Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2203 ATGGGTGTGTGGAAATTGGGTTTTTTTGGGCTTCTCTGTGCCGCTTTTCTCTTTACAATTGGTGCTGTGGAGCTGGGCAGGAACCAACCTACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCAAGATGCCTCAACCATATGTTTGCTGCCGAAATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACTCCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCGCCACGAATGATGAGAAGTGCTATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAGGGGGCAGATCACTTTTTTGTGGTTCCTCATGACTTTGGGGCATGCTTCCATTACCAGAGGAATCATGTGTGCTTGAAAGAAGGCTCAATTACCATTCCCCCATATGCTCCACCACAGAAAATGCATACCCACCTAATTCCTGACAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTCTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGGGCAGCGGTGTGGGAGAACTTTAAGGACAATCCGCTATTTGACATCTCCACTGAGCATCCAACCACATACTATGAGGACATGCAACGAGCCGTGTTTTGTCTATGCCCACTTGGATGGGCGCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGACATTGTTCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGATGAGGAGGATGTTCCTAAGTTGGATACAATTCTCACATCTATCCCACCAGAACTCATACTAAGGAAACAGAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCCCAACCTGGAGATGCCTTCCATCAAGTTTTAAACGGACTTGCGCGGAAGCTGCCGCATGGCAGCACCGTGCTCTTGAAACCACGGCAGAAGATCTTGAATTGGACTGCTGGACCTGTGGCTGACCTTAAACCTTGGTAA 1179 0.4589 MGVWKLGFFGLLCAAFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYSTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPELILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHGSTVLLKPRQKILNWTAGPVADLKPW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2203 392 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 168 386 IPR004263 GO:0006486|GO:0016757
Aed5g2203 392 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 167 IPR004263 GO:0006486|GO:0016757
Aed5g2203 392 Pfam Exostosin family 49 320 IPR040911 -
Aed5g2203 392 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 168 386 - -
Aed5g2203 392 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2203 Aed-Chr5 24096549 24099568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2203 K20870 - gmx:100812747 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0753 10 6177118 6181249 Aed5g2203 5 24096549 24099568 ECH
Aed5g2203 5 24096549 24099568 Aed5g2203 5 24096549 24099568 ECH
Aed5g2203 5 24096549 24099568 Aed10g0725 10 5948994 5951184 PCT
Aed10g0753 10 6177118 6181249 Aed5g2203 5 24096549 24099568 PCT