Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0753 ATGGATTTTTGGAAGGTGGGTTTGCTTGGTCTGCTTTGTGCTGCTTCTGTTTTTGCAATTGGGGCTGTGGAGCTTGGTCGGCATCAACCTACTGAGAGAATTTCAGGTAGTGCTGGTGATGTGTTAGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGCAAATATAATAAGAAAATTCTGCAAAAGGACCCGAGATGTCTCACTCATATGTTTGCTGCTGAGATCTTTATGCACCGATTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCCGAAGAAGCTGATTGGTTTTATACCCCTGTCTACACCACCTGTGACTTGACACCAAATGGCCTTCCTTTACCTTTCAAGTCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACAGGACAGAAGGGGCAGATCATTTCTTTGTAACCCCTCATGACTTTGGGGCATGCTTTCATTATCAAGAAGAGAAGGCAATTGAAAGAGGAATTCTTACATTGCTTCAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGCTTGAAAGAGGGCTCAATCACCATTCCTCCATATGCTCCACCACAGAAAATGCACACACACCTAATTCCTGAAAAGACTCCCAGGTCCATTTTTGTGTATTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCCGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCACTGTTTGACATTTCCACCGAGCATCCAACAACATACTATGAGGACATGCAACGAGCCGTGTTCTGTTTGTGTCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCCGTTGTATTTGGCTGCATCCCGGTTATCATTGCAGACGATATTGTTCTGCCATTTGCCGATGCAATCCCATGGGAAGAGATAGGTGTATTTGTTGATGAGAAGGATGTCCCTCGGTTAGATACTATACTCACATCTATTCCACCAGAAGTTATCTTAAGGAAACAGAGATTGCTTGCCAACCCTTCCATGAAGCAAGCTATGCTGTTCCCACAACCCGCGCAACCAGGAGATGCTTTCCATCAAGTTCTCAATGGCCTTGCGCGTAAATTGCCACACGACAGAAGTGTGTTCTTGAAACCAGGGGAGAAGGTCTTGAATTGGACTGCTGGCCCTGTGGGGGACCTTAAACCTTGGTAG 1251 0.454 MDFWKVGLLGLLCAASVFAIGAVELGRHQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVTPHDFGACFHYQEEKAIERGILTLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPRLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSVFLKPGEKVLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0753 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Aed10g0753 416 Pfam Exostosin family 49 344 IPR040911 -
Aed10g0753 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0753 Aed-Chr10 6177118 6181249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0753 K20870 - gmx:100800085 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0753 10 6177118 6181249 Aed5g2203 5 24096549 24099568 ECH
Aed10g0753 10 6177118 6181249 Aed10g0753 10 6177118 6181249 ECH
Aed10g0753 10 6177118 6181249 Aed5g2203 5 24096549 24099568 PCT