Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2113 ATGGATACTTCCCCACGTGCCGGTGAAGGTAGACACCGTTTTCCAGCATCCATTGTAGATTTATACAGACGAAGATTACCAAAAAGGAATGCAAAAGATGTTGAGAAGCCTATCCAGTTATCCATCCAAGATAGAAGTTCAAGATGCAACTTTTCTTTCATAAAACCTTTTGTCTTATTGATAACCATTTGCGGCACTTATGCAACGCTCCTGTATTCTTCAAAGGTTTACAACAACAACCATTTATCAAGCTCTGCCTCCGGGGCAAATTTCGTGAACAGGTGGATATGGAGTGGTTTAGATCCTCGTTATATATCTACTGTAGATATTAACTGGGGTGATGCATTGCAAATTACTGAGAAACTGACAGGGAAAAAAGAATTTCAAGGGGTTGGCCTTCTAAACTTCAACAAGACTGAACTAGATCATTGGGAACAGCTTATTCCTAATGCCACACACGTTGTTCTGGAGCTGGAGTATGCTGCAAGAAATGTGACATGGGAATCCCTGTACCCAGAATGGATTGATGAGGAAGAAGAAACCGAAGTTCCGATTTGTCCTTCTCTTCCAAGTCTTAGATCTCCTGGAATAAGGCTCAATCTCATAGCTGTGAAGCTTCCTCATGCCAATGGGGGGAATTGGTCTAGAGATGTTGCTCGGTTGCACTTGCAGCTAGCAGTAGCTACGCTTGCAACCTCTGTCAAAGGCAATTATCCTGTGTATGTGCTTTTTGTTACCAACTTCTTTCCAACACCTAATTTGTTTACCTGCAATGAACTTGTGGGACATGAAGGGAATGTGTGGTTGTACAAACCAAACTTGAATGTTTTGAGACAAAAACTCCACCTCCCACTAGGATCTTGTGAACTTGCACTTCCTTTGAGGGCCAAAGAGCTGAGTTATGTGGGAAATGTTCACAGAGAAGCATATGCAACAATTCTCCATTCAGCACACGTTTATGTATGTGGAGCTATTGCTGCTGCACAAAGCATCCGAATGTCTGGATCAACTCGAGACCTAGTTATACTTGTCGATGAGACAATAAGTGAGTACCACAGAAGTGGTTTAGAAGCAGCAGGGTGGAAAATTAGGACAATTCAAAGGATCAGAAACCCAAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCCGTTTGTGGCAGCTTACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATTCTAAGAAACATAGATTTCCTATTTGGAATGCCAGAAATCACTGCAACAGGAAACAATGGCACTCTTTTCAACTCAGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCAAGCTCCTCATGGATCATATTAATGAGTTTGAGTCCTACAATGGAGGAGACCAGGGATACTTGAATGAAGTATTCACATGGTGGCACAGGATACCGAGACACATGAACTTTTTGAAGCATTTTTGGATTGGAGATGAGGAAGAGAAGAAGCAAATGAAGACTATGTTATTTGGTGCTGACCCTCCAATTCTTTACGTGCTTCACTATCTAGGAATGAAGCCATGGTTGTGCTTCCGGGACTATGATTGTAACTGGAACAGTGATATCTTTCACGAGTTTGCAAGTGATGTTGCTCATGAAAGGTGGTGGAAGGTGCATGATGCAATGCCTAAGCTTTTGCAACAGTTTTGCATGTTGAAGTCAAAGCAGAAGGCACAGTTGGAATGGGATCGTAGGCAAGCTGAAATTGCTAACTACACAAATGGGCATTGGCAAATTGAAGTTAAAGACAAGAGGTTGAAGAAATGCATAGATAACTTGTGCTCATGGGAAAGCATGTTGAATCATTGGGGAGAGACCAATTGGACTGAAAATACTCAAACACCACCTGCCATTGCCACATCATCCCTTTCTGATTTGTGA 1914 0.4169 MDTSPRAGEGRHRFPASIVDLYRRRLPKRNAKDVEKPIQLSIQDRSSRCNFSFIKPFVLLITICGTYATLLYSSKVYNNNHLSSSASGANFVNRWIWSGLDPRYISTVDINWGDALQITEKLTGKKEFQGVGLLNFNKTELDHWEQLIPNATHVVLELEYAARNVTWESLYPEWIDEEEETEVPICPSLPSLRSPGIRLNLIAVKLPHANGGNWSRDVARLHLQLAVATLATSVKGNYPVYVLFVTNFFPTPNLFTCNELVGHEGNVWLYKPNLNVLRQKLHLPLGSCELALPLRAKELSYVGNVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHRSGLEAAGWKIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNGTLFNSGVMVVEPSNCTFKLLMDHINEFESYNGGDQGYLNEVFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNSDIFHEFASDVAHERWWKVHDAMPKLLQQFCMLKSKQKAQLEWDRRQAEIANYTNGHWQIEVKDKRLKKCIDNLCSWESMLNHWGETNWTENTQTPPAIATSSLSDL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2113 637 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Aed5g2113 637 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 16 617 - -
Aed5g2113 637 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
Aed5g2113 637 MobiDBLite consensus disorder prediction 618 637 - -
Aed5g2113 637 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 556 IPR029044 -
Aed5g2113 637 PANTHER GLYCOGENIN SUBFAMILY MEMBER 16 617 - -
Aed5g2113 637 CDD GT8_Glycogenin 308 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2113 Aed-Chr5 23443172 23446855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2113 7 637 Glycosyltransferase AT3G18660 63.804 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2113 K20890 - gmx:100783884 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2113 5 23443172 23446855 Aed5g2113 5 23443172 23446855 ECH
Aed5g2113 5 23443172 23446855 Aed10g0647 10 5207195 5209822 PCT