Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0647 GAAGATTTATACAAACAACGAAGATTGCCAAGAAGCAAAGCGAAAGATGCAGAGAAGCCTTTCCACTTAGTGCAAGATAGGAGCTCAAGATGCAAGTTGTCTTTCTTAAAATTCATCCTTTTGATAACCATATGCGGCACTTTTTTTACAACACCAACCATTTATCAAGCTCTGGCTCCCGACACTGAATGGGATGACATATTGAAGATTACTGAGAAGCTAACAGGGGAAGATGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAACACTGAACAAGCACATTGGGAGAATCTTATTCCTGAGGCAACACATGTTGTTCTGCCTCTTGAGTATGCTGCAAGAAATGTGACATGGGAGTCCTTGTACCCGGAATGGATCGATGAGGAAGAGGAAACTGAGGTTCCTGTTTGTCCTTCTCTGCCAAGTCTAAGATCCCCTGGCATAAGACTCAACCTCATTGCTGTGAAGCTTCCTTGTAGAAATGGAGGGAACTGGTCTAGAGACGTTGCTCGTTTGCACCTTCAGCTTGCAGCTGCTGCTCTTGCAACCTCCTTCAAAGGCAACTACCCTGTTTATGTACTCTTCATTAGCAACTGCTTTCCAATACCAAATTTGTTCACATGTAAAGAGATAGTTGCACGTGAAGGGAATGCGTGGCTATACAAACCAAACTTGAGTGTTTTGAGAGAAAAGGTCCAGCTTCCTTTAGGGTCTTGTGAACTTGCCCTTCCCATGAGAGGCAAAGAACTGGTTTACAATGGAAATGCTCCCAGAGAAGCCTATGCAACAATTCTCCATTCAGCTCATGTTTATGTTTGTGGAGCTATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACCTTGTAATACTCGTTGATGAGACAATCAGCAGCTATCACAGAAGTGGTTTGGAAGCAGCAGGTTGGAAGGTTAGAACAATACAAAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGCTATGGCAGTTAACAGATTATGACAAGATTATATTCATTGATGCAGATTTGCTCATACTGAGAAACATAGATTTCCTATTTGGAATGCCAGAAATCACTGCCACTGGAAACAATGCCACTCTCTTTAACTCAGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGGATCATATCAACGAGATCGAGTCCTACAATGGAGGGGACCAGGGATACTTAAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGCGACGAGGAAGAGAAGAAACAAATGAAAACTCTGTTGTTTGGCGCGGAACCTCCAATTCTGTATGTCCTTCACTATCTAGGAGTTAAGCCGTGGTTATGCTTCCGGGACTACGATTGCAACTGGAATGCTGATATCTTTCATGAGTTTGCAAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGTGCTTCTGCAGCAGTTTTGCCTTTTGCAGTCGAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAAATAGCAAACTACACAGACGGGCATTGGCGAATCAAAGTTAAAGATAGACGCTTGAGGAAATGTATAGATAATTTGTGCAACTGGAAAAACATGTTGAGGCACTGGGGAGAGACAAATTGGACAGATGATGAAACTTATACTCAAACACCACCTTCCATTACCACAGCATCTCTTTCTGCTTTATGA 1779 0.4311 EDLYKQRRLPRSKAKDAEKPFHLVQDRSSRCKLSFLKFILLITICGTFFTTPTIYQALAPDTEWDDILKITEKLTGEDELQGIGLVNFNNTEQAHWENLIPEATHVVLPLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAALATSFKGNYPVYVLFISNCFPIPNLFTCKEIVAREGNAWLYKPNLSVLREKVQLPLGSCELALPMRGKELVYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISSYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTLLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPVLLQQFCLLQSKQKAQLEWDRRQAEIANYTDGHWRIKVKDRRLRKCIDNLCNWKNMLRHWGETNWTDDETYTQTPPSITTASLSAL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0647 592 Pfam Glycosyl transferase family 8 266 369 IPR002495 GO:0016757
Aed10g0647 592 CDD GT8_Glycogenin 260 505 - -
Aed10g0647 592 PANTHER GLYCOGENIN SUBFAMILY MEMBER 61 569 - -
Aed10g0647 592 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 61 569 - -
Aed10g0647 592 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 258 506 IPR029044 -
Aed10g0647 592 SUPERFAMILY Nucleotide-diphospho-sugar transferases 259 505 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0647 Aed-Chr10 5207195 5209822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0647 1 592 Glycosyltransferase AT3G18660 65.335 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0647 K20890 - gmx:100809361 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2113 5 23443172 23446855 Aed10g0647 10 5207195 5209822 PCT