Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1771 ATGTCAACCCAAATTGAAAGTGGTTCTTCTTCTCATCATGGCTCCTCCTCATCTTCACAACCACTGAGCCGCTACGAGTCACAAAAGCGGAGAGACTGGAACACCTTTGGACAGTACCTGAAGAATCAGAGTCCCCCAGTTCCACTCTCTCAGTGCAACTTCAACCATGTGTTGGATTTCCTTCGGTACCTTGATCAATTTGGGAAGACCAAGGTTCACTTGCACGGTTGCATCTTCTTTGGCCAACCCGCCCCTCCAGCGCCCTGTGCCTGCCCTCTCAGGCAGGCATGGGGCAGCCTCGATGCCCTCATCGGCCGCCTTCGTGCTGCCTATGAGGAGCATGGCGGATCGTCAGAGACTAATCCCTTTGGAGGCGGAGCCATAAGGGTCTTCCTCCGCGAGGTCAAGGAGTGTCAGTCAAAGGCTAGAGGGATCCCATATAAGAAAAAGAAGAAGAAGAGAAACCCAATTATTAAGGGGACTACTCACACTGCAAAAGATCAAATCGAACAACAAGCTTCTTGA 525 0.5124 MSTQIESGSSSHHGSSSSSQPLSRYESQKRRDWNTFGQYLKNQSPPVPLSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPAPPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSSETNPFGGGAIRVFLREVKECQSKARGIPYKKKKKKRNPIIKGTTHTAKDQIEQQAS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1771 174 MobiDBLite consensus disorder prediction 1 24 - -
Aed5g1771 174 PANTHER PROTEIN G1-LIKE2 10 166 IPR040222 -
Aed5g1771 174 MobiDBLite consensus disorder prediction 145 159 - -
Aed5g1771 174 MobiDBLite consensus disorder prediction 1 27 - -
Aed5g1771 174 ProSiteProfiles ALOG domain profile. 24 151 IPR006936 -
Aed5g1771 174 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 10 166 - -
Aed5g1771 174 MobiDBLite consensus disorder prediction 143 174 - -
Aed5g1771 174 Pfam ALOG domain 16 137 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1771 Aed-Chr5 21349008 21352945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1771 - - gmx:100810655 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1771 5 21349008 21352945 Aed5g1771 5 21349008 21352945 ECH
Aed5g1265 5 11760040 11763643 Aed5g1771 5 21349008 21352945 ECH
Aed5g0943 5 7329255 7331959 Aed5g1771 5 21349008 21352945 ECH
Aed1g0754 1 8561473 8562012 Aed5g1771 5 21349008 21352945 ECH