Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1265 ATGTCCACCAAAGGAAAAGATCACATAGCAGAAGGATCATCATCAAGATCTTCTTCTGCTTCTGTTGCTGTTGCTGCTGCTGCTTCTGATCATCAACAACAACAACAACCTCTGAGTAGGTATGAATCTCAAAAGAGGAGGGATTGGAACACTTTTGGTCAGTACTTGAGGAATCAGAGGCCTCCTGTGGCACTTTCACAGTGCAATTCCACCCAAGTGCTTGATTTCCTAAGGTACTTGGACCAGTTTGGGAAAACAAAAGTGCATGTCCAAGGTTGTCTCTTCTTTGGCCAAGTTGATCCACCTGGCCCCTGCACTTGCCCTCTCAAACAAGCTTGGGGGAGCCTTGATGCTCTCATTGGGAGGCTAAGAGCTGCATATGAAGAAAATGGAGGCTTGCCTGAGACTAATCCATTTGCCAGTGGCGCCATAAGGGTTCATCTTCGCGAAGTTCGAGACTCTCAAGCTAAGGCAAGAGGGATCCCTTATAAGAAGAAGAAGAAGAAGAGGAATAATAATCTCATGATGAAGGCCAAAGGGGATAGCTCAAACTTACCTTTGCACTCTTCAGCAGTAAAATTTTGA 585 0.4547 MSTKGKDHIAEGSSSRSSSASVAVAAAASDHQQQQQPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSTQVLDFLRYLDQFGKTKVHVQGCLFFGQVDPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVHLREVRDSQAKARGIPYKKKKKKRNNNLMMKAKGDSSNLPLHSSAVKF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1265 194 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 3 187 - -
Aed5g1265 194 ProSiteProfiles ALOG domain profile. 40 167 IPR006936 -
Aed5g1265 194 MobiDBLite consensus disorder prediction 165 194 - -
Aed5g1265 194 PANTHER PROTEIN G1-LIKE2 3 187 IPR040222 -
Aed5g1265 194 MobiDBLite consensus disorder prediction 12 40 - -
Aed5g1265 194 MobiDBLite consensus disorder prediction 1 44 - -
Aed5g1265 194 MobiDBLite consensus disorder prediction 176 194 - -
Aed5g1265 194 Pfam ALOG domain 32 153 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1265 Aed-Chr5 11760040 11763643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1265 - - jre:109012278 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0943 5 7329255 7331959 Aed5g1265 5 11760040 11763643 ECH
Aed1g0754 1 8561473 8562012 Aed5g1265 5 11760040 11763643 ECH
Aed5g1265 5 11760040 11763643 Aed5g1771 5 21349008 21352945 ECH
Aed5g1265 5 11760040 11763643 Aed5g1265 5 11760040 11763643 ECH
Aed5g1265 5 11760040 11763643 Aed1g0754 1 8561473 8562012 PCT