Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1022 ATGGCAACTGCTGATGGAAGTCCATTGTTAAATGTTCCTCCTCCAGGGGGTATTGTGAGGGTTGGTATTGCTTTTGAACAGTATCTGTCCAACACTTCAGTTGAACAGTTACTTTTTGTCCTGGATCTCTATGCTTATTTTGGGAGAGTTAGTGAGAAAATAGCAATAGCTGGAAAAAAGGAACAATTGAAGGATGTCAGGAACAAATCTTATAGTGGAAAGCTGATAGACAAGATTCCCAGTGACACTTCTGTAACTCTGACAATCAATAATCTCCAACTTCAATTTCTTGAATCATCTTCTGTGAATACTGAAGGAATGCCTTTAACACAGTTTGTTGGAGATGGTCTGTCTGTTAGTGCCACTCATAGAACCCTAGGTGGTGCTATTAAGAGAGTTGGGATAGATTGTGTGGATTCCAAGGAGCACTTGGCATGTATAAAGGACTCATATTTTAGTACCGGAGACAATGTTCCCTCAATAAGTGATGATGGATACCATAACCTAAGACCTGTTTTCTGGGTGCATAACAACGAAAAAAAACTATTGAATGGAAATGCTCATTCATTCCCATTTCTGGACATAAGTATGGTGCATGTCATACCATTTTGTATAGTAGACATGGGGTCTCATACTTTGAATGTCTCAGCTTCTGTATCTGGTGTTCGACTTGGCGGGGGAATGAACTATTCTGAGGCCCTCCTGCATCGATTTGGAATACCAGGGCCTGATGGTGGTCCAGGGAAGGGTCTGTGTAAAGGGTTAGAAAACTTACCAACTGGACCATTGGTGAAACTTTTTAAGACAACACCTCTGATTGTTGATGATTCAGAAAATGTTGAAACTACGGGAGAAGGGAAAGATACCAGTTTTCCACACATGAAGAAGCCAGATATTGTGGATGTAACTATAGAGTTGAGAGACTGGTTATTTGCTCTTGAAGGTGCACAAGAGATGGCTGAAAGATGGTGGTTCTCAAGCCATGAAGATGTAAAAAGAGAAGAGAGGTGTTGGCACACAACTTTCCATAACTTGAGAGTAAATGCAAAAAGTTGCCCAATGAATGTTCCAGACAGAAAATCACAATCACGCAGAATACAACCATATCCTGTGGAACTGGTTATGATTGGAGTTCAAGGGCTGCAGATCATGAAGCCCCACTCCCAAAAGGGCATTCCTTCATCAATGATAACTGTAAATGACGTTAAAGAATTCATTGACAAAGTTGGGGGAATTGATCTTGAAGTGGGCTTGATACTATCTAAGGATAATGAAGATGAAGTGAATGAGGCAGTAATAACCAAGGAAGAGGTTCAACACCTCACTTTTCTGTGCAAATCTGAATTTGATTCTGTGGGCTGGATAACAGCTGGAATTCTACGGCTATTTAAGCTAGAAGGTTCTGTTAGCCAGTCTATAATTGATCAGCTTGGCAACCTAGACACTTCTGGAGGTGCTAATGCTATAGCATCAGAATACCAGAATCTATTAGAACTTGGTCATGGCTGTTCATTTATTTCCCTGTAG 1527 0.4073 MATADGSPLLNVPPPGGIVRVGIAFEQYLSNTSVEQLLFVLDLYAYFGRVSEKIAIAGKKEQLKDVRNKSYSGKLIDKIPSDTSVTLTINNLQLQFLESSSVNTEGMPLTQFVGDGLSVSATHRTLGGAIKRVGIDCVDSKEHLACIKDSYFSTGDNVPSISDDGYHNLRPVFWVHNNEKKLLNGNAHSFPFLDISMVHVIPFCIVDMGSHTLNVSASVSGVRLGGGMNYSEALLHRFGIPGPDGGPGKGLCKGLENLPTGPLVKLFKTTPLIVDDSENVETTGEGKDTSFPHMKKPDIVDVTIELRDWLFALEGAQEMAERWWFSSHEDVKREERCWHTTFHNLRVNAKSCPMNVPDRKSQSRRIQPYPVELVMIGVQGLQIMKPHSQKGIPSSMITVNDVKEFIDKVGGIDLEVGLILSKDNEDEVNEAVITKEEVQHLTFLCKSEFDSVGWITAGILRLFKLEGSVSQSIIDQLGNLDTSGGANAIASEYQNLLELGHGCSFISL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1022 508 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 492 - -
Aed5g1022 508 PANTHER UNCHARACTERIZED 1 492 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1022 Aed-Chr5 8084867 8088888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1022 - - gmx:100782617 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0717 1 8299201 8307904 Aed5g1022 5 8084867 8088888 PCT