Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0926 ATGGCTTCGGGGACTATGGTGGGAGCAGATGACGAAGCCAGAGAGAAACAGAGATTCGGGGAGAGAAAGGTTTACACGAGGAGGAAAGTGTTGAGCGGCCAAAAGAAAGACCCTAACGCTGCGAACGCCATTGCTTCCGCCACTGAAAATAACGCCACTGCGACTTACACAGTTATCAATGACAACAGTATCAATAACAGCACCTTCCAGAAGAGCAACGCTGGTGAGGCCAAGAGCAATAGTGATAATGTTTTGGCTCAGCCTCCGGCCCCGCAACAGGCTGTGTCGGAGGATGGGAATTTGGGTCAGCCACCAGTGGGTTCGGGATTAGAAGATGGGGATTTGGTGCAGCCTCAATTGGAGAAGCAGAATATGGTTCAAACTGAAGTGGGTTCAGGATTGGAGGATGGGAGTAAGGCTCAGCCACAGGGTGAGGATCAACATATGACACATACAAGTTTGGAGGATATGGTTCAACCTCAATCCGAGGATGGGGATATGGCTCAACTGCAATTGGAGGATCAGAATATGGTTCAACCTCAATCTGAGGATGAGGATATGGCTCAACTGCAGTTGGAGGATCAGAATATTGTTCAACCTCGATCAGAGGATGGGGGTATTGCTCAACTGCAATTGGAGGGTCAGGATACTGCTCAGCCTCAATTGGAGGATCAGGATACTGCTCAGCCTCAATTGGAGGATCAGAATACAGCTAAGCCCCTAGGAAGTTCTCGTTTTGAAGATGAGAATATGGCTCAGCCGCAAGCGAGTTCAAGATCAGAGAATGGGAACATGGCTCAACTGCAAGTAAGTTCAAGATCAGAGGATGGGAATACAGCTCTGCCGCAAGTGAGTTCAAAATTGGAGGGTAGAAAGTCTCCTCAGCCTCAAGTGAATTCAAGATTGGATGGGAATACAGGTCAGCCACCGGTAGTGCTGGTTTCTGATGACTTGTGCAGCCGGCAGCCTGATGAACCTTCTAGCCTCAATGTTCAGCAGGAGGATGATGGACCTTCAAGCCCCATCCGTCAGCAGGAGGAGGCGTTTCTTAGCTCCCGAGACCTTACATTAGGGGAAGGGGTTGCGGATCCATGGCTGATTGACCGAATCAAGTTAAACTTGGCCTCAAAATCAAAGCAGCAGATGCTGGAGCTTCGGTGGAAGCTTGAATGTGAGCTTGATGTTGTGAGAAGTTTGGTTAATAAGATTGAAGTGAAGCAGAGTCAAGTTGGTGGATATGGCAACTCAAATGTGATAAGTGGCAGTGAGATTAATAATGTGCGCGGAGCCAAGTGTGCTCACTCAGAGGTGGCAACTGCTGGTGTTCTGCAGGAACCTGCCAGTACCAGGTCTTTGCATCAGTTAAGTTTGTCAATGTTGGAGAATAGTCAACGGTTCAGTGAAACTGTTGAGAAGGAGAAGAGAACACCTAAAGCAAACCAATTTTATCATAACTCAGAGTTCTTGCTTGCAAAAGATAAATTTCCACCCGCAGAGACTAATAAGAAGTCGAAATTGAATTGGAAGAAGCAAGGTGGGGGAGAAATGGGACATGGTCTTGGGATGAGATCTAAGTTTTTCAAAAGCTGTATTTCACTGCTTGACAAATTGATGAATCATGCTCATGGTTGGGTGTTTAATACTCCTGTTGATGTTGAGGGTCTTGGTTTGCATGATTATTTTACTATCATCACTCATCCAATGGACTTGGGAACTGTGAAGTCAAGGATGAACAAGAATTGGTACAAATCACCAAAGGAATTTGCAGAGGATGTGCGACTCACTTTTCATAATGCCATGACGTATAATCCAAAGGGACACGAAGTTCATATGATTGCAGAGAAGTTATCAAAGATATTTGAGAACAGATGGGCTATAATTGAGTCAAATTACAATCGGGAGATGAGACATGGCATAGATTATGGGGCAGCTCCCCCTGTACCTTCACCTTTGTTTAGAAGGGTTTATGCTTTTACACCACCACCACCTATTGATACGAGAAGGGTTTTGGATAGATCAGAATCAATGACACAAACTCCAAAGTTAATGGGCATTACTCCATCAAGTAGAACCCCAGCTCCAAAAAAGCCAAAGGCAAAAGATCCTCATAAAAGAGACATGACATTTGAGGAAAAGCAAAAACTAAGCACTAACCTTCAAAGTTTACCTACAGAGAAGGTTGATGCTATTGTACAAATCATTAAGAAGATAAACTCAGCACTTAATCAACATGATGATGAAATTGAAGTGGACATTGATAGTCTGGATCCCGAGACTCTCTGGGAGCTTGATAGACTTGTTACCAACTATAAGAAAAGTTTGAGCAAAAACAAAAGAAAGGCTGAACTTGCTCAAGCTAGAGCAGAAGCTTTGCAGCAGAATGCCATCCAGAAGAGCCAGGCACCAGCTATTGCAGAGATTCCAAAAGAAACACAAACAGATGAACGAAATCTTTCCCAATCCTTGCCTGTGCAAGAGGGAAATCAACCAGATAATGGGAGTAGTTCAAGCAGCTCCAGCAGTGATTCTGGATCTTCTTCAAGTGATTCTGATAGTGATAGTTCCTCAGCCTCTGGATCTGATGCAGGGTCGCAAGGGACCTGA 2604 0.4493 MASGTMVGADDEAREKQRFGERKVYTRRKVLSGQKKDPNAANAIASATENNATATYTVINDNSINNSTFQKSNAGEAKSNSDNVLAQPPAPQQAVSEDGNLGQPPVGSGLEDGDLVQPQLEKQNMVQTEVGSGLEDGSKAQPQGEDQHMTHTSLEDMVQPQSEDGDMAQLQLEDQNMVQPQSEDEDMAQLQLEDQNIVQPRSEDGGIAQLQLEGQDTAQPQLEDQDTAQPQLEDQNTAKPLGSSRFEDENMAQPQASSRSENGNMAQLQVSSRSEDGNTALPQVSSKLEGRKSPQPQVNSRLDGNTGQPPVVLVSDDLCSRQPDEPSSLNVQQEDDGPSSPIRQQEEAFLSSRDLTLGEGVADPWLIDRIKLNLASKSKQQMLELRWKLECELDVVRSLVNKIEVKQSQVGGYGNSNVISGSEINNVRGAKCAHSEVATAGVLQEPASTRSLHQLSLSMLENSQRFSETVEKEKRTPKANQFYHNSEFLLAKDKFPPAETNKKSKLNWKKQGGGEMGHGLGMRSKFFKSCISLLDKLMNHAHGWVFNTPVDVEGLGLHDYFTIITHPMDLGTVKSRMNKNWYKSPKEFAEDVRLTFHNAMTYNPKGHEVHMIAEKLSKIFENRWAIIESNYNREMRHGIDYGAAPPVPSPLFRRVYAFTPPPPIDTRRVLDRSESMTQTPKLMGITPSSRTPAPKKPKAKDPHKRDMTFEEKQKLSTNLQSLPTEKVDAIVQIIKKINSALNQHDDEIEVDIDSLDPETLWELDRLVTNYKKSLSKNKRKAELAQARAEALQQNAIQKSQAPAIAEIPKETQTDERNLSQSLPVQEGNQPDNGSSSSSSSSDSGSSSSDSDSDSSSASGSDAGSQGT 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0926 867 CDD Bromo_plant1 527 624 IPR037377 -
Aed5g0926 867 SUPERFAMILY Bromodomain 521 632 IPR036427 GO:0005515
Aed5g0926 867 SMART bromo_6 519 629 IPR001487 GO:0005515
Aed5g0926 867 MobiDBLite consensus disorder prediction 212 306 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 321 342 - -
Aed5g0926 867 Gene3D - 700 781 IPR038336 -
Aed5g0926 867 Pfam Bromodomain 530 615 IPR001487 GO:0005515
Aed5g0926 867 MobiDBLite consensus disorder prediction 177 342 - -
Aed5g0926 867 PANTHER TRANSCRIPTION FACTOR GTE4 1 862 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 39 99 - -
Aed5g0926 867 Gene3D - 508 639 IPR036427 GO:0005515
Aed5g0926 867 ProSiteProfiles NET domain profile. 697 778 IPR027353 -
Aed5g0926 867 MobiDBLite consensus disorder prediction 814 867 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 129 149 - -
Aed5g0926 867 Coils Coil 774 801 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 9 34 - -
Aed5g0926 867 PANTHER OSJNBA0053K19.4 PROTEIN 1 862 - -
Aed5g0926 867 ProSiteProfiles Bromodomain profile. 538 610 IPR001487 GO:0005515
Aed5g0926 867 MobiDBLite consensus disorder prediction 1 113 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 674 707 - -
Aed5g0926 867 Pfam Bromodomain extra-terminal - transcription regulation 707 768 IPR027353 -
Aed5g0926 867 MobiDBLite consensus disorder prediction 794 867 - -
Aed5g0926 867 MobiDBLite consensus disorder prediction 177 198 - -
Aed5g0926 867 PRINTS Bromodomain signature 573 591 IPR001487 GO:0005515
Aed5g0926 867 PRINTS Bromodomain signature 557 573 IPR001487 GO:0005515
Aed5g0926 867 PRINTS Bromodomain signature 591 610 IPR001487 GO:0005515
Aed5g0926 867 PRINTS Bromodomain signature 541 554 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0926 Aed-Chr5 7069760 7077464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0926 - K11684 gmx:100817007 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0770 1 8665671 8671434 Aed5g0926 5 7069760 7077464 PCT