Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0770 ATGGCTTCGGTGCCAATAGTTGGAGATGATAGCGCCAAAGAGAAGCAGAGATACACCGAGGGTAAGGTTTACACTAGGAAAGCGTTTAAAGGTCCTAAGAACAAAGGTAACGCCGTCGACACCGTGAACGTCGTTCCTCTTCCTCCTACCACCACAGATACTACCAACGTCCGCGACAACGGTTCTGCTACCGTTACTGCCGTTGATAACAATAAGAAGGATGACAGTACTGTCGATAATGGAAACGTTAGGGCCACGGATAATAGCAATAACGCCTCGGTTCAGCCTGTGCCGGTGCCGGGGGATGGGAATTCAGCTCACCCACAAGTGAATTCGAGGTTGGATGTTGTTTCGGATGACTCTTCTAGCTTGAACCGTCCTCAGGACGAGCCTTTGAGTTTTCCGGTCCGTCCTCAGGATGAGCCTTTGCGTGTTCCGGATTGTCCTCAGGATGAGCCTTTGAGTGTTCCAGGTGTGCCAGAGCGGTCACCAGGGCCGGGGCCGGAGAATTGTGTTAGGATCAGTTTGGCTGCACGGTCTAAGCAGGAGAAGCGGGAGCTGAGGAGGAGGAGGCTTGAGGGTGAGCTTGATAGGGTTAGAAATTTGGTGAATAGGATTGAAGAGAAATTGGAGGTGCTTGGTGGGTATGGTAATTCAGATATGTTGGTGGATCGTGGGATTGGTAATGGGGGTGGAGCTAAGAGGGCTCACTCGGAGGTGGCATCTGCTGTTGTTACACCGCGAGAGCCTACCCGGTCTTTGCATCAGTTGAGTGTGTCGGTGTTGGGGAGTAGTCAAGGGGTTGGTGAAATTGTTGAGAAGGAGAAGAGGACGCCCAAGGCAAACCAGTTCTATCTCAATTCGGAGTTCTTGCTTGCGAAAGATAAGTTTCCACCTGCGGAAAGTAACAAGAAGTCTAAATTGAATGGGAAGAAGCATGGTGCCGGTGAGATGGGACATGGAATGGGATCCAAACTTTTAAAGACTTGTAGCTCGTTGCTTGAGAAGTTGATGAAGCACAAGCATGCTTGGGTATTTAATGTTCCGGTCGACGTGGAGGGTCTTGGTTTGCATGATTACTTTACTATCATCACACAACCAATGGACTTGGGTACTGTGAAGTCAAGGCTGAACAAGAATTGGTACAAATCACCCAAGGAGTTTGCTGAGGATGTTAGACTTACATTTCGTAATGCGATGACTTATAATCCCAAAGGCCAAGATGTTCATATAATGGCAGAGCAGCTATCTGATATTTTTGAAGAAAAATGGGCTATGGTAGAAGAATCAAATTACAACCGTGAGATGAGATATGGCCTGGATTATGGAGCACCTTCACCTCTGTCTAGAAAGGCTCCTCCATTGCGGCCCCCACCAATTGATATTAGGCGGATTTTGGATAGGTCAGAATCAATGACACATCCTCCAAAATTCATGAGCATCACTCCGTCATCTCGAACCCCTGCTCCCAAAAAGCCCAAGGCCAAAGATCCTCATAAAAGAGATATGACGTATGAGGAAAAGCAGAAACTCAGCACAAATCTTCAGAGTCTACCTTCTGAGAAGCTAGATGCAATTGTACAGATCATTAAAAAGAGAAATTCAGCACTTTCCCAACATGATGATGAAATTGAAGTGGACATTGATAGTGTGGATACTGAGACTCTCTGGGAGCTTGATAGATTTGTGACCAACTACAAGAAAAGTTTGAGCAAAATCAAGAGGAAGGCTGAACTTGCTATTCAAGCTAGAGAACGAGCTGAGCAGAATGCCCAGCAGAAGGGTCAGGCACCAGTTGCAGTTGAGATTCCGAAAGAAACACAAGCAGATGAAAGAAATGTTCCCCCATCCTTGCCTGAGCACAGACAAATTCCAGTGGATAATGGGAGTACGACAAGTAGTTCAAGCAGCTCCAGCAGTGATTCAGGCTCATCGTCAAGTGGTACTTTGATTAATTATTTAATTCTGATAGTGATAGTTCCTCAGCCTCTGGTTCTGATGCAGGGTCACCAAGAACCTGAATTCGTTCTGTCAGATTATGGATCTGAATTTAGCTGTTGGTTTGTAAAGGAAGCATTCTGA 2082 0.4645 MASVPIVGDDSAKEKQRYTEGKVYTRKAFKGPKNKGNAVDTVNVVPLPPTTTDTTNVRDNGSATVTAVDNNKKDDSTVDNGNVRATDNSNNASVQPVPVPGDGNSAHPQVNSRLDVVSDDSSSLNRPQDEPLSFPVRPQDEPLRVPDCPQDEPLSVPGVPERSPGPGPENCVRISLAARSKQEKRELRRRRLEGELDRVRNLVNRIEEKLEVLGGYGNSDMLVDRGIGNGGGAKRAHSEVASAVVTPREPTRSLHQLSVSVLGSSQGVGEIVEKEKRTPKANQFYLNSEFLLAKDKFPPAESNKKSKLNGKKHGAGEMGHGMGSKLLKTCSSLLEKLMKHKHAWVFNVPVDVEGLGLHDYFTIITQPMDLGTVKSRLNKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHIMAEQLSDIFEEKWAMVEESNYNREMRYGLDYGAPSPLSRKAPPLRPPPIDIRRILDRSESMTHPPKFMSITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWELDRFVTNYKKSLSKIKRKAELAIQARERAEQNAQQKGQAPVAVEIPKETQADERNVPPSLPEHRQIPVDNGSTTSSSSSSSSDSGSSSSGTLINYLILIVIVPQPLVLMQGHQEPEFVLSDYGSEFSCWFVKEAF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0770 693 ProSiteProfiles NET domain profile. 493 574 IPR027353 -
Aed1g0770 693 MobiDBLite consensus disorder prediction 300 320 - -
Aed1g0770 693 MobiDBLite consensus disorder prediction 29 171 - -
Aed1g0770 693 SMART bromo_6 319 429 IPR001487 GO:0005515
Aed1g0770 693 Coils Coil 570 594 - -
Aed1g0770 693 Gene3D - 308 439 IPR036427 GO:0005515
Aed1g0770 693 MobiDBLite consensus disorder prediction 105 129 - -
Aed1g0770 693 PRINTS Bromodomain signature 357 373 IPR001487 GO:0005515
Aed1g0770 693 PRINTS Bromodomain signature 373 391 IPR001487 GO:0005515
Aed1g0770 693 PRINTS Bromodomain signature 341 354 IPR001487 GO:0005515
Aed1g0770 693 PRINTS Bromodomain signature 391 410 IPR001487 GO:0005515
Aed1g0770 693 SUPERFAMILY Bromodomain 309 428 IPR036427 GO:0005515
Aed1g0770 693 Pfam Bromodomain extra-terminal - transcription regulation 503 564 IPR027353 -
Aed1g0770 693 Gene3D - 496 573 IPR038336 -
Aed1g0770 693 MobiDBLite consensus disorder prediction 605 646 - -
Aed1g0770 693 CDD Bromo_plant1 326 424 IPR037377 -
Aed1g0770 693 MobiDBLite consensus disorder prediction 81 98 - -
Aed1g0770 693 MobiDBLite consensus disorder prediction 300 314 - -
Aed1g0770 693 MobiDBLite consensus disorder prediction 472 503 - -
Aed1g0770 693 PANTHER TRANSCRIPTION FACTOR GTE4 1 648 - -
Aed1g0770 693 MobiDBLite consensus disorder prediction 44 71 - -
Aed1g0770 693 Coils Coil 189 209 - -
Aed1g0770 693 MobiDBLite consensus disorder prediction 624 646 - -
Aed1g0770 693 PANTHER OSJNBA0053K19.4 PROTEIN 1 648 - -
Aed1g0770 693 Pfam Bromodomain 330 414 IPR001487 GO:0005515
Aed1g0770 693 ProSiteProfiles Bromodomain profile. 338 410 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0770 Aed-Chr1 8665671 8671434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0770 - - gmx:100781720 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0770 1 8665671 8671434 Aed1g0770 1 8665671 8671434 ECH
Aed1g0770 1 8665671 8671434 Aed5g0926 5 7069760 7077464 PCT