Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0818 ATGAGTCGCTACGATCCCAATCCCTTCGACGACGACGAACCGGTCGAGGTTAATCCATTTGCGGATGGAGCAGCTAAAGGAAAAAAAGGGTCAGGGCAATCAAGCTATAGTGGAGGTGCCTTTTATACTACTAACACTGGAAGTGTTCCCTCTGCAAACTCAAGACTCTCACCCCTTCCTCCAGAGCCTTATGATCGTGGTGCAACTATTGACATCCCCCTTGATAATACAAAGGACATAAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAGCAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTGTCCCATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTTCAAAGGACCCAGTACATTGCATTTACAACATGGTTGGGTTTGATTCTGTGTCTTTTATGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCAATTATCTATTTTATTTCTGGTGTTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGTGCTTTGAAATTTGGCTGGTTCTTCTTGCTTTACATGGCAAGTTTTATTTGCACATTGCCTTTTGCATTTTGGCAGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTTTGGCTGCGATTGACGTGTTGGGCGACAATGCATTGGTTGGGGTACGTTTCAATTATATTCTACTTCATTGGGTTTGGATTTTTCTGTCTTGAGTCAGTGCTGAGCATCTGGGTTATACAGCAAGTGTATATGTACTTCCGTGGCAGTGGCAAGGCTGCAGTTTTAAAGCGTGATGCTGCGAGAGGGACAATGATGGCAGCTCTATGA 951 0.4322 MSRYDPNPFDDDEPVEVNPFADGAAKGKKGSGQSSYSGGAFYTTNTGSVPSANSRLSPLPPEPYDRGATIDIPLDNTKDIKAKEKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFCPIIHHDIGKEIPIHLQRTQYIAFTTWLGLILCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGSYVLWYRPLYRAMRTDSALKFGWFFLLYMASFICTLPFAFWQQLLHQLSSKENLSQVFWLRLTCWATMHWLGYVSIIFYFIGFGFFCLESVLSIWVIQQVYMYFRGSGKAAVLKRDAARGTMMAAL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0818 316 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 316 - -
Aed5g0818 316 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 316 IPR007273 GO:0015031|GO:0016021
Aed5g0818 316 Coils Coil 77 107 - -
Aed5g0818 316 MobiDBLite consensus disorder prediction 1 71 - -
Aed5g0818 316 Pfam SCAMP family 117 296 IPR007273 GO:0015031|GO:0016021
Aed5g0818 316 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0818 Aed-Chr5 6158012 6164165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0818 2 316 Miscellaneous Gene Families AT1G11180 56.832 3.27e-115 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0818 K19995 - gmx:100796729 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0818 5 6158012 6164165 Aed5g0818 5 6158012 6164165 ECH
Aed1g0846 1 9164645 9168384 Aed5g0818 5 6158012 6164165 PCT