Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0846 ATGAGTAACTACGACACCAACCCCTTCGCCGAAGAAGAGGTTAATCCCTTCGCCGATGGAGGAGGCTCTAAAGGAAAATCATCGGGGCTATCAAATCGTGGTGGTGCATTCCCTAGTACCAATCAAGGAGGTGCAGCCCCAAGGCTTTCACCCCTGTCTCCTGAGCCTTATGATCGTTCAGCAACTGTAGACATTCCTCTTGATTCATCAAAGGACCTCAAAGCAAAGGAAAAGGAGCTCCAAGTTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAACGAAAGGAAGATGCTATAGCTCGAGCTGGAATTGTCATAGAGGAGAAAAATTGGCCAGCTTTTTGCCCCATCATTCATCACGACATTGCAAGTGAAATACCAATACATCTTCAATCAATCCAGTATGTTGCATTTACAACATGGTTGGGTTTGATTGTATGTCTTTTATGGAATATTGCAGCAGTTACTGTAGCTTGGATAAAAGGAGAAGGTCTTTCAATCTGGTTTCTATCTATCATATACTTTATTTCCGGTGTTCCAGCTTCCTATGTGACGTGGTATCGTCCTCTTTATCGTGCCACAAGGACGGATAGTGCTCTAAGGTTTAGCTGGTTTTTCTTGTCTTACGGGGTGCACATTATCTTTTGCGTTTTTGCTGCAGTTGCTCCTCCAATTGTCTTCAAAGGGAAATCTCTCACAGGTATTCTGCCTGCCTTTGAGGTATTGGACTACAATGCAATGGTTGGGATACTCTACTTTATTGGGTTTGGATTATTCTGCATTGAATCACTGCTGAGCATTTGGGTTATTCAGCAAGTATACATGTACTTCCGGGGTAGTGGAAAGGCTGCAGCAATGAGGCGTGAGGCTGCGGAAGGGGCCATGAGGGCAGCACTATGA 906 0.4459 MSNYDTNPFAEEEVNPFADGGGSKGKSSGLSNRGGAFPSTNQGGAAPRLSPLSPEPYDRSATVDIPLDSSKDLKAKEKELQVREAELKRREQELKRKEDAIARAGIVIEEKNWPAFCPIIHHDIASEIPIHLQSIQYVAFTTWLGLIVCLLWNIAAVTVAWIKGEGLSIWFLSIIYFISGVPASYVTWYRPLYRATRTDSALRFSWFFLSYGVHIIFCVFAAVAPPIVFKGKSLTGILPAFEVLDYNAMVGILYFIGFGLFCIESLLSIWVIQQVYMYFRGSGKAAAMRREAAEGAMRAAL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0846 301 Pfam SCAMP family 110 281 IPR007273 GO:0015031|GO:0016021
Aed1g0846 301 Coils Coil 70 100 - -
Aed1g0846 301 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 301 IPR007273 GO:0015031|GO:0016021
Aed1g0846 301 MobiDBLite consensus disorder prediction 25 47 - -
Aed1g0846 301 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 301 - -
Aed1g0846 301 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0846 Aed-Chr1 9164645 9168384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0846 3 301 Miscellaneous Gene Families AT1G11180 62.418 2.30e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0846 K19995 - gmx:100820206 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0846 1 9164645 9168384 Aed5g0818 5 6158012 6164165 PCT