Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0808 ATGAGGCGAAGAAGTGCAGATTTCCGAAGGCCAGGGAGGTGGAGGCACCAAGTTGTGGTGTGGTGGATAGGGTGCAGCGTTGTGCTTCTTTTCTTTATTTATATTCTCACCAAAGGCACCCCCACAATTGACTCCACTCACCAATTCTCAAGGAGAAATTTCAGGCATGACAGGGTTATAGGAGACTTCAATGTTACAGAAGAGATGCTAAGCCCCGAGTCAGTGGCCAGACAAATCAATGATCAAATGTCCCTAGCCAAAGCTTTTGTTGTAATTGCCAAAGAAAGTAATAATCACCAATTTGCTTGGGAGTTAAGTGCTCAAATCCGCATTTCACAGATTTTCCTCTCAAACGCTGCCACTAGGCGTGCTCCTTTAACAATCAAGGAATCCGAACATACTATCAGTGACATGGCATTATTGCTATATCAGGCCCAGCAGCTCCATTATGATAGTGCAAGCATGATCATGAGACTGAAAGGAAAAATCCAAGCCCTTGAAGAACAAATGAGTTCTGCTAATGAGAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTTCCAAAGAGCCTATATTGCCTTGGTGTCAGGTTGACATCAAAATGGTTCAACAATCTGAGCTTGCAAAAGAATTTGAAGGACCAAAGACAAGTGGAGATGAAACTCAAGGACAATGATCTTTACCACTTCTGTGTCTTCTCTGATAACATTCTTGCCACTTCAGTAGCAATCAACTCAACTTCAATAAATTCTAAAAATCCAGAGAAGATTGTTTTCCACGTTGTCACAGATGAGATAAATTATGCTGCAATGAAGGCATGGTTTTCATTAAACGATTTCCGAGGGGTGACGATTGAAGTTCAGCAGTTTGAAGACTTCGGTTGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAGCTGCAAGACTCAGAGATACAGAACTATTACTTCAAAGGCGGCAAGAGTGATGATAGCAAGACCCCCATCAAGTTCCGGAATCCGAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGAGCTGAAGAGGATGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTCTCTGAGCTTTTCACTATTGATTTGAATGGCAATGTGAATGGAGCAGTTGAGACATGCATGGAGACATTCCATAGATACCATAAGTATTTGAACTACTCACACCCTCTAATAAGAGCACATTTTGACCCTGATTCTTGTGGATGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGGAAGAGGAATGTAACAGGAATCTACCACTATTGGCAAGAAAAGAATGCAGACAGAACATTGTGGAAACTTGGTACCTTGCCACCAGGGTTGTTAACCTTTTATGGACTAACTGAACCCTTGGACCCATCATGGCATGTGTTGGGTTTTGGCTACACAAATGTTGATCCTCAGATGATTGAAAGAGGTGCTGTTCTTCACTTCAATGGGAACTCCAAACCGTGGTTGAAGATTGGAATGGATAAGTACAAGCCTCTGTGGGAAAAATACGTGGATTATTCTCACCCTCTATTGCAACAGTGTAATTTTCATTGA 1608 0.4192 MRRRSADFRRPGRWRHQVVVWWIGCSVVLLFFIYILTKGTPTIDSTHQFSRRNFRHDRVIGDFNVTEEMLSPESVARQINDQMSLAKAFVVIAKESNNHQFAWELSAQIRISQIFLSNAATRRAPLTIKESEHTISDMALLLYQAQQLHYDSASMIMRLKGKIQALEEQMSSANEKSSKYGQIAAEEVPKSLYCLGVRLTSKWFNNLSLQKNLKDQRQVEMKLKDNDLYHFCVFSDNILATSVAINSTSINSKNPEKIVFHVVTDEINYAAMKAWFSLNDFRGVTIEVQQFEDFGWLNASYVPVLKQLQDSEIQNYYFKGGKSDDSKTPIKFRNPKYLSMLNHLRFYIPEVFPELKRMVFLDDDVVVQKDLSELFTIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDSCGWAFGMNVFDLVQWRKRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQMIERGAVLHFNGNSKPWLKIGMDKYKPLWEKYVDYSHPLLQQCNFH 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0808 535 Coils Coil 156 176 - -
Aed5g0808 535 CDD GT8_like_1 229 523 - -
Aed5g0808 535 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 535 - -
Aed5g0808 535 Pfam Glycosyl transferase family 8 236 509 IPR002495 GO:0016757
Aed5g0808 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 533 IPR029044 -
Aed5g0808 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Aed5g0808 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0808 Aed-Chr5 6100604 6103002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0808 1 535 Glycosyltransferase AT2G20810 75.651 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0808 K13648 - gmx:100792018 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0808 5 6100604 6103002 Aed5g0808 5 6100604 6103002 ECH
Aed1g0852 1 9184997 9189018 Aed5g0808 5 6100604 6103002 PCT