Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0852 ATGCGGCGAAGACCGACGGATTATCGTAGGCCAGTGCGTAGGAGGGTTCCAGATGCGTTGTGGTGGGCATTGTGCTGTGCAGTGATTCTTCTCTTTGTTTATATTCTGAGCAAAGGGAACAAAATTGAGTCCAAACCCGCTTTGTCCAAGAGAACTTTCAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGAAGAGATGTTAAACTCTAACTCAGTCACAAGACAACTCAATGATCAGATATCCCTGGCAAAAGCTTTTGTTGTAATTGCAAAGGAAAGTAACAATCTCCAATTTGCTTGGGAATTAAGTGCCCAGATCCACAATTCTCAGATGCTCCTCTCAAATGCTGTCACTAGGCGAGTTCCTTTAACAACCAGAGAAACAGAAAGGGCTATCCGTGATATGGCTTTATTGTTATACCAGGCCCAGCAGCTCCATTATGACAGTGCAACCATGATCATGAAATTCAAAGCAAAAATTCAAGCTCTTGAGGAACAGATGAATTCTGTTAGTGAAAAGAGTTCAAAATATGGACAAATAGCTGCAGAAGAAGTCCCAAAAAGCCTCTACTGTCTTGGTGTCCGGTTGACTACAGAATGGTTCAAAAACTTCAATTTGCAAAAGAAATTGAAGGACAAAAGGAAAGTGGAGATGAAGCTTAAGGATAACAATCTTTACCACTTCTGCATTTTCTCCGACAACATTCTTGCAACTTCTGTTGTGGTCAACTCAACTGCAATAAATTCTAAAAATCCCAATATGATTGTTTTCCACCTTGTCACTGACGAAATAAACTATGCTGCAATGAAGGCATGGTTTTCAATGAATAATTTCCGTGGGGCGACTGTGGAAGTTCAGAAGTTTGAAGACTTTGGTTGGTTAAATGCTTCATATGTTCCTGTGCTGAAGCAACTTCAAGACTCAGAAATACAGAGCTACTACTTTTCTGGCAACAGTGATGAGGGAAGAACACCCATCAAGTTCCGTAACCCTAAATATTTATCCATGCTTAATCACCTGAGGTTTTACATCCCTGAAGTTTTTCCTGCACTAAAGAAGGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGATCTTTTCTCCATCAATTTGAAAGAGAATGTAAATGGAGCTGTTGAAACATGCATGGAGACATTTCATAGATACCACAAATACTTGAACTACTCCCATCCTCTTATACGTGCACATTTTGACCCTGATGCTTGCGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTAACCGGCATCTACCACTACTGGCAGGAAAAGAACGTAGACCGGACATTGTGGAAACTCGGTACCTTGCCACCTGGACTGTTGACGTTTTATGGATTAACTGAGCCTTTGGATCCATCATGGCATGTTTTGGGTTTTGGCTACACCAATGTTGATCCTCAGTTGATAGAGAGAGGAGCTGTACTACACTTCAACGGGAACTCCAAACCATGGTTGAAGATTGGGATTGAGAAGTACAAGCCCCTATGGGAAAAATATGTTGAATACTCTCATCCTTTATTGCAACAGTGTAACTTCCATTGA 1602 0.4089 MRRRPTDYRRPVRRRVPDALWWALCCAVILLFVYILSKGNKIESKPALSKRTFKHDKIMEGLNITEEMLNSNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIHNSQMLLSNAVTRRVPLTTRETERAIRDMALLLYQAQQLHYDSATMIMKFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNFNLQKKLKDKRKVEMKLKDNNLYHFCIFSDNILATSVVVNSTAINSKNPNMIVFHLVTDEINYAAMKAWFSMNNFRGATVEVQKFEDFGWLNASYVPVLKQLQDSEIQSYYFSGNSDEGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSDLFSINLKENVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKYVEYSHPLLQQCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0852 533 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 533 - -
Aed1g0852 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 528 IPR029044 -
Aed1g0852 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Aed1g0852 533 CDD GT8_like_1 228 520 - -
Aed1g0852 533 Pfam Glycosyl transferase family 8 233 507 IPR002495 GO:0016757
Aed1g0852 533 Coils Coil 155 175 - -
Aed1g0852 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 533 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0852 Aed-Chr1 9184997 9189018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0852 1 533 Glycosyltransferase AT2G20810 78.731 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0852 K13648 - gmx:100792018 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0852 1 9184997 9189018 Aed1g0852 1 9184997 9189018 ECH
Aed1g0852 1 9184997 9189018 Aed5g0808 5 6100604 6103002 PCT