Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0802 ATGGCCACTGTTACTTCTTCTTTCTCTTTCTCCACTCTCACTCAATCCTCGCAGAGGAACCTCACCACTCTCTCTTCTTCCAATTCACCAACCCTTCGCTTCAGCGTTGGTTTCTCCTGCCACTATGTTGGAGTTCGAGCTTCCAATTCCGCTTCCAAAATGGTTGTTCGATGCTCCTCGTCCGTCGCAGAACCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAAGCGACCAATTCCTAGTATCTACAACACCGTGCTGCAGGAGCTCATTGTTCAGCAACATTTAATGAGATACAAGAGATCATATCGCTATGATGCTGTGTTTGCCCTCGGATTCGTTACTGTATATGAGCAACTTATGGAAGGGTATCCAAGTGATGAGGACCGAGAGGCCATCTTCCAAGCATACATCCAGGCATTGAAAGAAGATCCTGAACAATACAGAGTAGATGCAAAGAAATTGGAAGAGTGGGCTCGAGCTCAAAACCCAACTTCACTAGTAGAATTTTCATCTAGTGAAGGAGAAGTTGAGGGTATATTAAAGGATATTGCCGAAAGAGCAGGAGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAATAGGCCTCTTTCGTCTTCTTGAGTTAGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTCTGTGCGGTTTTGAATGTCAACAAAAGAAGTGTGGATCGGGACTTGGATGTGTATCGTAACTTGCTTTCCAAGTTGGTTCAAGCTAAAGAGCTTCTAAAGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGCTGAACCACAAAAGTCTAATGAGGCCATTACACAACAGCAATTTTCTAGCCTTTAG 873 0.4307 MATVTSSFSFSTLTQSSQRNLTTLSSSNSPTLRFSVGFSCHYVGVRASNSASKMVVRCSSSVAEPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDREAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVEFSSSEGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQFSSL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0802 290 Coils Coil 244 274 - -
Aed5g0802 290 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 283 IPR017499 GO:0010207|GO:0015979
Aed5g0802 290 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 283 - -
Aed5g0802 290 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 63 269 IPR017499 GO:0010207|GO:0015979
Aed5g0802 290 MobiDBLite consensus disorder prediction 265 290 - -
Aed5g0802 290 Hamap Protein Thf1 [thf1]. 62 270 IPR017499 GO:0010207|GO:0015979
Aed5g0802 290 Pfam Thylakoid formation protein 67 272 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0802 Aed-Chr5 6054497 6057829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0802 - - gmx:100779964 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0802 5 6054497 6057829 Aed5g0802 5 6054497 6057829 ECH
Aed1g0864 1 9247015 9249944 Aed5g0802 5 6054497 6057829 PCT