Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0864 ATGGCGGCTTTCAGTACTTCTCTCTCTTTCTCAGCAGTGACTCATTGCTCAGAAAGAAAAGTAACCCTCTCCTCCACTCGTTTTCTCGCTTCTTCTTCAGAACTCTTTGCTTTCCGCACCCACTATGTTGCTGTTCGAGCCTCCAATTCTGCTTCTCAAATGGTTGTTCAATGCATGTCCTCTGCCACAGATGTTCCCACTGTTTCGGAGACAAAGTTAAATTTCCTCAAGACATATAAGCGACCAATACCTAGTATTTACAACACTGTGCTGCAGGAGCTAATAGTGCAGCAACATTTAATGAGATACAAGAAATATTACCGCTATGACCCTGTCTTTGCTCTTGGTTTTGTCACTGTTTACGACAAGCTCATGGAAGGGTACCCTAGTGATGAGGACAGAGAAGCCATCTTCCAAGCCTACATTAAGGCATTGAAGGAAGATCCACAACAATACAGAATAGATGCACGAAAGTTGGAAGAGTGGGCTCGAGTTCAAAATCAAACTTCCCTTGTTGAGTTTTCATCCAAAGAAGGAGAAGTTGAGGGGATTTTAAAGGACATTGCAGAAAGAGCAGTGGGAAAAGGGGAATTCAGTTATAGTCGTTTCTTTGCAGTTGGCCTCTTTCGCCTTCTTGAGTTGGCAAATGCCTCGGAACCAACTGTTTTGGACAAGCTTTGTGCGGCATTGAACATCAACAAAAGAAGTGTTGATCGGGACTTGGATGTGTATCGTAACCTGCTTTCAAAGTTGGTTCAAGCAAAAGAGCTGCTAAAGGAGTATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGCTGAACCACAAAAGGCTAATGAGGCAGTCACAACATGTTTAGGACAACAGTTGTCTGGTCTGTAG 882 0.4342 MAAFSTSLSFSAVTHCSERKVTLSSTRFLASSSELFAFRTHYVAVRASNSASQMVVQCMSSATDVPTVSETKLNFLKTYKRPIPSIYNTVLQELIVQQHLMRYKKYYRYDPVFALGFVTVYDKLMEGYPSDEDREAIFQAYIKALKEDPQQYRIDARKLEEWARVQNQTSLVEFSSKEGEVEGILKDIAERAVGKGEFSYSRFFAVGLFRLLELANASEPTVLDKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKANEAVTTCLGQQLSGL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0864 293 Hamap Protein Thf1 [thf1]. 62 270 IPR017499 GO:0010207|GO:0015979
Aed1g0864 293 Pfam Thylakoid formation protein 67 272 IPR017499 GO:0010207|GO:0015979
Aed1g0864 293 Coils Coil 244 274 - -
Aed1g0864 293 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 284 IPR017499 GO:0010207|GO:0015979
Aed1g0864 293 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 284 - -
Aed1g0864 293 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 64 269 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0864 Aed-Chr1 9247015 9249944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0864 - - gmx:100814341 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0864 1 9247015 9249944 Aed1g0864 1 9247015 9249944 ECH
Aed1g0864 1 9247015 9249944 Aed5g0802 5 6054497 6057829 PCT