Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0781 ATGCCTGAGGCTCCTAATGGCAAAATTGGTGGTGATGGTGGTGCTACTACTAATACTAGCATCATCGACATCATCGAACACAACAATAAGAAAGCACTGAAATACATTGAAGATGTTACTAGCAACGCTGATGAAACTCAGAAAAGGGTCCTTGCTGAGATCCTTTGTTCTAGTGCACACGTTGAGTACCTTCAACGCCATGGCTTGGATGGGCGCATAGATAGAGAGAGTTTCAAGAAGATCATGCCTGTGGTCACATACGAGGATTTAAAGCCAGATATTGATCGTATTGCTAATGGTGATACATCCCCGATTTTGTGTTCCAAACCAATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACCATAGAAGAAGAGCTAGAGCGAAGATCATTGCTCTACAGCCTCTTGATGCCAGTGATGGACCAATTCGTTCCCGGTTTAGACAAAGGCAAAGGAATGTACTTTCTGTTCATAAAATCAGAAGCCAAAACCCCTGGTGGACTCTTAGCTCGTCCAGTTTTAACAAGCTACTACAAAAGCTCACACTTCAAGAACAACAATAACAACAGAACACACGACCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCCCAAATGCTCTCTGGACTTTCCCAAAACGACCAAGTTCTCCGTGTTGGGGCTGTTTTCGCCTCGGGTTTCATCCGTGCAATTAAGTTCCTAGAAAAACATTGGGTAAGTTTGTGCCGTGACATAAGAAATGGAACCATAGACCATGAAATCACTGACTCATCCGTTAGAGAGGCCATCATGAGGGTACTGATCAAACCGAACCCCAACCTTGCGGATTTCATAGAGGGTGAGTGCAAGAAAGGGTCGTGGAAGGGGATCATTACTAGGTTGTGGCCTAACACTAAGTATGTTGATGTTATTGTTACTGGGACCATGGCTCAGTATATTCCTATATTGGATTACTATAGCAATGGTCTACCCCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTACTTTGGTCTAAATTTGAACCCTTTGTGTGATCCTAGTGAGGTTTCTTACACCCTTATTCCCACCATGGCTTACTTTGAGTTCTTGCCCCTCAATAAGATGAAGGAGCAGGAATGTTTGGTTGATCTTGTGGATGTGGAGCTGGGTCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGGTACCGGGTTGGTGACATACTCCGTGTGGCAGGATTCAAGAACAATGCACCTCAATTCAACTTCGTATGCAGAAAGAATGTGGTTCTGAGTATTGACTCTGACAAAACCGATGAGATCGAACTACAAAACGCTGTGAAGAATGGAGCCAACCACCTAGCCCAATTCGGTGCATCACTCATAGAATACACAAGCTGCGCTGACACGTCCACTATCCCAGGTCACTATGTGCTATACTGGGAAATCAGCATGAACAGCAATAGTACTATTGTTGACCAAACCCCAATTCCTGGTTCTGTTTTTGAAGAGTGTTGCTTTGAAGTTGAAGGGTCTCTCAACAGCGTGTATAGACAAGGGAGGGTGTCTGAGTCCATTGGAGCATTGGAAATCAAGATTGTGGAGAGTGGAACTTTTGATAAGGTTATGGACTTTGCTCTTGGCCAGGGTGCGTCCATAAATCAGTATAAGACACCACGTTGTGTGAAATATGCTCCCATTGTTGAGCTTCTTGACTCCAAGACTGTTTCCAATTACTTCAGTCCAAAGTGTCCACAGTGGGTTCCTGGTCACAAAAAGTGGTGCATGCAACCTTGA 1851 0.443 MPEAPNGKIGGDGGATTNTSIIDIIEHNNKKALKYIEDVTSNADETQKRVLAEILCSSAHVEYLQRHGLDGRIDRESFKKIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKNNNNNRTHDPYTNYTSPIETILCLDSYQSMYSQMLSGLSQNDQVLRVGAVFASGFIRAIKFLEKHWVSLCRDIRNGTIDHEITDSSVREAIMRVLIKPNPNLADFIEGECKKGSWKGIITRLWPNTKYVDVIVTGTMAQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLPLNKMKEQECLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEIELQNAVKNGANHLAQFGASLIEYTSCADTSTIPGHYVLYWEISMNSNSTIVDQTPIPGSVFEECCFEVEGSLNSVYRQGRVSESIGALEIKIVESGTFDKVMDFALGQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPQWVPGHKKWCMQP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0781 616 Pfam GH3 auxin-responsive promoter 36 581 IPR004993 -
Aed5g0781 616 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 21 612 - -
Aed5g0781 616 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 21 612 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0781 Aed-Chr5 5872206 5875951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0781 23 599 EF-hand Containing Proteins AT1G23160 50.172 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0781 K14487 - gmx:100783196 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0892 1 9447119 9448878 Aed5g0781 5 5872206 5875951 PCT