Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0768 ATGTCTGGGTCCTTGGGATTCTTTGTGGGTCTTATGATGTTGTTGTTGGTCGGGGTGGCCAATGCTGTGGCTAATAACACTTCCAGCTTCGATCAACTCTTCCAACCAAGTTGGGCCTTTGACCACTTCATTCATCAAGGGGAGCTACTCAAACTCAAACTTGATAATTTTTCCGGTGCTGGTTTTACTTCCAAGAGCAAGTATATGTTTGGGAAAGTCACCATCCAGCTTAAGCTCGTGGAAGGTGACTCTGCTGGAACGGTCACTGCTTTCTATATGTCATCGGAGGGTCCAAGCCACAACGAGTTCGATTTTGAGTTTCTAGGCAACACCACAGGGGAACCCTACTCGGTCCAAACCAACGTGTATGTTAACGGTGTGGGCAACAGGGAGCAAAGGCTCAACCTTTGGTTCGACCCCACCAAGGATTTCCACTCATACTCTATCTTCTGGAATCAACGTCAAGTTGTATTTTTGGTGGATGAGACGCCGATAAGGGTGCACACAAATATGGAGCACAAGGGAATACCGTTCCCAAAGGACCAACCCATGGGAGTGTACAGTTCAATATGGAACGCAGACGATTGGGCCACGCAGGGTGGACGTGTGAAAACGGATTGGAGCCACGCACCCTTCTTTGCCACCTACAAGAACTTCGAGATCAATGCCTGTGAGTGCCCCGTGGCAGTGGCTGGAACCGATAACGCGAAGAGGTGCACCAGTGGTGAAGGCAAGAAGTATTGGTATGACGAGCCCAATTTGGCTGAACTCAACTTGCACCAGAGCCACCAACTTATGTGGGTTAGGGCCAGACACATTTTCTATGACTATTGCTCTGACACTTCTAGGTTCCCAGTCACTCCTGCTGAGTGTGTCCATCACCGTCACAACTAA 894 0.4922 MSGSLGFFVGLMMLLLVGVANAVANNTSSFDQLFQPSWAFDHFIHQGELLKLKLDNFSGAGFTSKSKYMFGKVTIQLKLVEGDSAGTVTAFYMSSEGPSHNEFDFEFLGNTTGEPYSVQTNVYVNGVGNREQRLNLWFDPTKDFHSYSIFWNQRQVVFLVDETPIRVHTNMEHKGIPFPKDQPMGVYSSIWNADDWATQGGRVKTDWSHAPFFATYKNFEINACECPVAVAGTDNAKRCTSGEGKKYWYDEPNLAELNLHQSHQLMWVRARHIFYDYCSDTSRFPVTPAECVHHRHN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0768 297 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 4 295 - -
Aed5g0768 297 CDD GH16_XET 26 291 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aed5g0768 297 Gene3D - 16 297 - -
Aed5g0768 297 Pfam Glycosyl hydrolases family 16 33 208 IPR000757 GO:0004553|GO:0005975
Aed5g0768 297 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 245 291 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aed5g0768 297 PRINTS Glycosyl hydrolase family 16 signature 60 78 IPR008264 GO:0004553|GO:0005975
Aed5g0768 297 PRINTS Glycosyl hydrolase family 16 signature 136 153 IPR008264 GO:0004553|GO:0005975
Aed5g0768 297 PRINTS Glycosyl hydrolase family 16 signature 118 131 IPR008264 GO:0004553|GO:0005975
Aed5g0768 297 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 4 295 IPR044791 GO:0004553
Aed5g0768 297 PIRSF EndGlu_transf 3 296 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aed5g0768 297 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 216 IPR000757 GO:0004553|GO:0005975
Aed5g0768 297 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 295 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0768 Aed-Chr5 5755168 5758241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0768 60 296 Glycoside Hydrolase AT4G03210 73.840 4.51e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0768 K08235 - gmx:100785982 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0768 5 5755168 5758241 Aed1g0896 1 9459873 9462478 PCT