Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0752 ATGGCGACTCTTGATTCCGACGTGCCTATGGTTTCCGCCGGCGAGCCATCGAGCAGCGCCGGCCCGTCTTCCAAGAAGCCCAAGCGCTTCGAGATCAAGAAGTGGAACGCCGTCGCTCTCTGGGCTTGGGACATCGTTGTCGATAACTGTGCTATCTGCCGGAACCACATCATGGATCTCTGTATCGAGTGCCAAGCCAACCAGGCTAGCGCCACTAGTGAGGAATGCACTGTGGCTTGGGCTTTTGAACCTTCAATTCTTCCTGGTGATGTTTGTGCTATGCTGTATTGTGTGAAGTTGTTATTGGGCTGTGGTGGCAGCTGCTATCTCCTTGATCTTGTTGGCTCCTTAACCTTTTGGCCACTGCCTCTGCCTCACATTGATGTGGCTTTTCAGGAGTTTGTAACCATGCTTTTCACTTCCATTGCATTAGTCGATGGCTCAAGACCCGTCAAGTTTGTCCTCTAG 468 0.5192 MATLDSDVPMVSAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWAFEPSILPGDVCAMLYCVKLLLGCGGSCYLLDLVGSLTFWPLPLPHIDVAFQEFVTMLFTSIALVDGSRPVKFVL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0752 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 97 IPR013083 -
Aed5g0752 155 SUPERFAMILY RING/U-box 28 81 - -
Aed5g0752 155 PANTHER RING-BOX PROTEIN 1A 1 82 - -
Aed5g0752 155 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 30 67 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Aed5g0752 155 MobiDBLite consensus disorder prediction 1 26 - -
Aed5g0752 155 PANTHER RING BOX 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0752 Aed-Chr5 5630610 5633385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0752 K03868 - gmx:100500045 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0928 1 9647599 9649765 Aed5g0752 5 5630610 5633385 PCT