Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0746 ATGGATTCTACGTCGGTGCACAAGGAGGATGATATTGATGAGCCCCTGTTATCAGATTCAGCACAACAAGCACCTTCTTTTACTACTCATTCTTCTTCATTGAGCTCAAAGCTGCAGCACGGTGGTTCAGATATTGGTGGTGAACTTGAGCGAATACTATCAAACACTAGCGTCCCTTTGGTGAAGCGTCTTGGAGCCGCAACATGCGTGGAGTTGAAGCTCTTGTTTCACTTGGCTGCTCCTGCTGTTGTCGTCTACCTTATCAACTATGTCATGTCTATGTCCACACAAATCTTCTCTGGCCACCTTGGTAACCTCGAACTCGCTGCTGCTTCCCTCGGAAACACCGGCATCCAAGTATTCGCTTATGGCCTCATGTTCCTCCAAGCGCAGAGCATAGTGGCGCCGAGCGCGTACATTTCGACAGCAACGTTGCTGATCCACCTCGTGCTGAGTTATGTTGTGGTCTACGAGGTGGGGCTTGGTCTGTTGGGCGCGTCGCTGGTTCTGAGTTTCTCGTGGTGGATCATTGTGATTGCACAGTTTGTGTACATTGTGAAGAGTGAGAAGTGTAGGAAGACGTGGAGAGGGTTCAGCTTTCAAGCGTTTTCGGGGCTGCCGGAGTTTTTTAAGCTGTCGGCGGCTTCGGCGGTGATGCTGTGCCTAGAGACGTGGTACTTCCAGATTTTGGTTCTGCTTGCGGGGTTGCTTCCTCATCCTGAGTTGGCTCTGGATTCTCTTTCTATTTGTACCACGTTTAATGGTTGGGTTTTCATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGGGCAAGAAATCCAAAATCAGCATCATTTTCGGTGGTGGTGGTGACATTGATTTCTTTGGTAATATCGGTGATTGTGGCACTTGTGGTGTTGGCAATACGAGATGTCCTTAGTTATGCCTTCACAGACGGTGAAGAGGTGGCTGCTGCTGTCTCAGATCTTTGTCCTCTCCTTGCTCTTTCCATTCTCCTCAACGGCATTCAACCTGTCTTATCTGGGGTAGCTGTTGGATGTGGATGGCAAACTTTTGTTGCGTATGTAAACGTTGGTTGTTATTATGGAGTTGGCATACCACTGGGTTCGGTTCTCGGTTTCTATTTCAAACTCAGTGCTAAGGGAATATGGGTGGGAATGCTAGGTGGCACGGTTTTGCAAACAATTATTTTAGTGTGGACCACATTTCGAACGGATTGGAATAAAGAGGTTGAAGAAGCAGAAAAGAGATTGAACAAGTGGGAGGATACAACGGAGCCACTTGTCAACAACTGA 1317 0.4776 MDSTSVHKEDDIDEPLLSDSAQQAPSFTTHSSSLSSKLQHGGSDIGGELERILSNTSVPLVKRLGAATCVELKLLFHLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMFLQAQSIVAPSAYISTATLLIHLVLSYVVVYEVGLGLLGASLVLSFSWWIIVIAQFVYIVKSEKCRKTWRGFSFQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTFNGWVFMISVGFNAAASVRVSNELGARNPKSASFSVVVVTLISLVISVIVALVVLAIRDVLSYAFTDGEEVAAAVSDLCPLLALSILLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPLGSVLGFYFKLSAKGIWVGMLGGTVLQTIILVWTTFRTDWNKEVEEAEKRLNKWEDTTEPLVNN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0746 438 Coils Coil 411 431 - -
Aed5g0746 438 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g0746 438 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 126 - -
Aed5g0746 438 MobiDBLite consensus disorder prediction 1 15 - -
Aed5g0746 438 PANTHER PROTEIN DETOXIFICATION 32 126 - -
Aed5g0746 438 Pfam MatE 216 376 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed5g0746 438 TIGRFAM matE: MATE efflux family protein 123 391 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed5g0746 438 CDD MATE_eukaryotic 71 420 IPR045069 GO:0042910|GO:1990961
Aed5g0746 438 PANTHER MULTIDRUG RESISTANCE PROTEIN 127 425 - -
Aed5g0746 438 PANTHER PROTEIN DETOXIFICATION 127 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0746 Aed-Chr5 5566139 5572843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0746 K03327 - gmx:100801718 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0746 5 5566139 5572843 Aed5g0746 5 5566139 5572843 ECH
Aed1g0933 1 9700370 9704127 Aed5g0746 5 5566139 5572843 PCT