Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0933 ATGGGTTCAGCCGAGAAAGAGCCACTTTTGTTAACACCGTCAAGTTCAAAGCACGAGTCCGATGGAGAACTCGAGAGAATTCTCTCCGACAACACCGCACCGTTCATGAAGCGCGTGGGAGCCGCCACATGGATCGAGATGAGGCTCCTCTTCTACCTCGCCGCCCCCGCTGTCTTCGTCTACCTCATCAACTACGTCATGTCCATGTCCACTCAAATCTTCTCCGGCCATCTCGGCAACCTCGAACTCGCCGCCGCCTCCCTCGGCAACACCGGCATCCAAATCTTCGCCTACGGCCTCATGCCGATTTTGTTATTCCTCGGGGAATCGCCGAGAATAGCGTCGGCGGCGGCGCTGTTCGTGTACGGATTGATCCCTCAGATCTTCGCCTACGCGGTGAACTTTCCGATTCAGAAGTTCCTGCAGGCGCAGAGCATAGTGGCGCCGAGCGCGTACATATCAGCGGCGACGCTGGTGGTGCACCTGGGGCTGAGTTACGTGGCGGTGTACAAGATCGGGCTGGGGCTGCTGGGCGCGTCGCTAGTGCTGAGCCTGTCGTGGTGGATCATCGTGATTGCGCAGTATGTGTACATTGTGAAGAGCGAGAGGTGCAGGCGCACGTGGCGGGGGTTCACGTGGGAAGCGTTCACGGGTTTGCCCGGGTTTTTCAAGTTGTCCGCTGCGTCAGCAGTGATGCTGTGTCTGGAGACGTGGTATTTTCAGATTCTTGTTTTGCTCGCCGGCCTTCTTCCTAATCCCGAATTGGCTCTTGATTCCCTCTCTATTTGTACCACAATTTCAGGATGGGTGTTCATGATCTCTGTTGGATTCAATGCAGCTGCAAGCGTGAGGGTGAGCAACGAACTAGGAGCAAGAAATCCAAAATCAGCATCGTTTTCGGTGTTGGTGGTGACATTGATTTCTTTCATAATATCAGTGATTGCAGCACTGGTGGTTCTTGCATTAAGGGATGTGATTAGCTATGCCTTCACGGGGGGTGAAGCGGTTGCTGCTGCAGTTTCAGATCTTTGCCCACTCCTTGCTCTTGCTCTTGTCCTCAATGGCATTCAACCCGTCTTATCTGGTAGAGGAGGCAGTCAAGAGGTTGAACAAATGGGAGGACACAAAGGAACCACTACTAAACTGAAGAATAACTTGTTTATGTAG 1167 0.533 MGSAEKEPLLLTPSSSKHESDGELERILSDNTAPFMKRVGAATWIEMRLLFYLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMPILLFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAATLVVHLGLSYVAVYKIGLGLLGASLVLSLSWWIIVIAQYVYIVKSERCRRTWRGFTWEAFTGLPGFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGARNPKSASFSVLVVTLISFIISVIAALVVLALRDVISYAFTGGEAVAAAVSDLCPLLALALVLNGIQPVLSGRGGSQEVEQMGGHKGTTTKLKNNLFM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0933 388 MobiDBLite consensus disorder prediction 1 24 - -
Aed1g0933 388 PANTHER MULTIDRUG RESISTANCE PROTEIN 102 362 - -
Aed1g0933 388 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 101 - -
Aed1g0933 388 TIGRFAM matE: MATE efflux family protein 97 363 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0933 388 CDD MATE_eukaryotic 46 362 IPR045069 GO:0042910|GO:1990961
Aed1g0933 388 PANTHER PROTEIN DETOXIFICATION 102 362 - -
Aed1g0933 388 PANTHER PROTEIN DETOXIFICATION 14 101 - -
Aed1g0933 388 Pfam MatE 102 167 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g0933 388 Pfam MatE 229 362 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0933 Aed-Chr1 9700370 9704127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0933 K03327 - gmx:100795338 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0933 1 9700370 9704127 Aed1g0933 1 9700370 9704127 ECH
Aed1g0933 1 9700370 9704127 Aed5g0746 5 5566139 5572843 PCT