Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0719 ATGGCCATGGATTTTCGCATCTCTGGCGTCACGATCCTCTTCTTCCTCCTCCCAGCCCTCACATTCTCACTCTCGCAGGGTCAGATAAACTCAAACTCAATCCTCGTGGCTCTGTTGGACTCGCATTACACCGAGGTAGCTGAGTTAGTTGAAAAAGCCATGCTTTTGCAGACTCTCGAAAACACGGTTATGAAGCACAACATCACAATCTTCGCTCCCAGAAACGAAGCTCTCGAACGCGATCTCGACCCTGATTTCAAGCGGTTCCTCCTCGAACCCCGCAATCTCCATGCCCTCCAAACCCTCCTCATGTCCCACATCGTCCCCAAAAGAATCACCAAACCCGATTTTCAACCCGGGACGGGTAAGTTGGGTAAAGCGACCCGACACAAAACTTTGGCGCTGCAGCACCACCTCATTCTCCACACCCTGAATTTGACCCACTGGAATGTTGACTCTTCCCGGGTCATTAACCCGAATTCGGTTATCCGACCTGACGGAGTCATCCACGGCATCGACACGCTCCTCATCCCTCGCTCCGTCCAAGACGACTTCAACCTCCGCCGTAATCTCATCTCCATCGCCGCCGTGAAACCCGAATCCGCGCCGGAGGTCGACCCACGGACGCATCGTCTCAAAAAACTCGCGCCACCATCGCCGGCGGGTTCCCCGCCGGCCCTTCCGATCTACGACGCAATGGCGCCGGGGCCCTCCCTCGCGCCAGCTCCGGCTCCGGGACCTGGCGGGCCCCACCACCACTTCAACGGCGAGAAACAGGTAAAAGACTTCATCCACACGCTCCTCCACTACGGCGGTTACAACGAAATGGCGGATATTCTGGTAAACTTAACATCACTGGCGACGGAGATGGGACGGTTGGTTTCGGAGGGTTACGTTTTAACGGTGCTGGCTCCTAACGACGAGGCCATGGCGAAGTTAACGGCGGACCAGTTAAGTGAACCGGGTTCGCCCGAACAGATTATGTACTATCACTTGATTCCCGAGTACCAGACCGAGGAGAGCATGTACAATGCCGTTAGAAGGTTCGGGAAGGTCCGTTACGACACGTTACGTTTGCCGCACAAGGTGACGGCGCAGGAGGCTGACGGCTCCGTTAAGTTCGGGCATGGGGACACGTCCGCTTACTTGTTCGACCCGGATATTTACACGGATGGACGGATCTCCGTTCAGGGAATTGACGGCGTTCTGTTTCCGCCTCAGGAGGAAGAGGCTGGGCCCGTTACCCGAGCCCAGCCCGCTAAGGTCGTCGCTAAGCAAAGAAGAGGAAAATTGTTGGAAACAGCATGTTGGATGGTTGGAAGCTTTGGACAGAGTTCTAGATTCAGCTCTTATTCAGTTGGTAGTGCTGCTGCTACAAATCTCTAG 1386 0.5519 MAMDFRISGVTILFFLLPALTFSLSQGQINSNSILVALLDSHYTEVAELVEKAMLLQTLENTVMKHNITIFAPRNEALERDLDPDFKRFLLEPRNLHALQTLLMSHIVPKRITKPDFQPGTGKLGKATRHKTLALQHHLILHTLNLTHWNVDSSRVINPNSVIRPDGVIHGIDTLLIPRSVQDDFNLRRNLISIAAVKPESAPEVDPRTHRLKKLAPPSPAGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEKQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTADQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVTAQEADGSVKFGHGDTSAYLFDPDIYTDGRISVQGIDGVLFPPQEEEAGPVTRAQPAKVVAKQRRGKLLETACWMVGSFGQSSRFSSYSVGSAAATNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0719 461 Gene3D FAS1 domain 279 406 IPR036378 -
Aed5g0719 461 SUPERFAMILY FAS1 domain 33 179 IPR036378 -
Aed5g0719 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 450 IPR044654 -
Aed5g0719 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 450 - -
Aed5g0719 461 SUPERFAMILY FAS1 domain 239 406 IPR036378 -
Aed5g0719 461 Gene3D FAS1 domain 35 179 IPR036378 -
Aed5g0719 461 ProSiteProfiles FAS1/BIgH3 domain profile. 260 403 IPR000782 -
Aed5g0719 461 ProSiteProfiles FAS1/BIgH3 domain profile. 30 176 IPR000782 -
Aed5g0719 461 MobiDBLite consensus disorder prediction 199 256 - -
Aed5g0719 461 SMART fasc_3 69 179 IPR000782 -
Aed5g0719 461 SMART fasc_3 301 406 IPR000782 -
Aed5g0719 461 Pfam Fasciclin domain 42 178 IPR000782 -
Aed5g0719 461 Pfam Fasciclin domain 285 405 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0719 Aed-Chr5 5367242 5370532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0719 - - gmx:100790599 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0961 1 9905595 9906962 Aed5g0719 5 5367242 5370532 PCT