Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0708 ATGTCAGCAGCTCCTATGACCAACAACAACAAGGTTCAAAGCCAAGTCCTATTATCTTCTTCTTCTTCCTCTGTGAGGATAGAGGAAGAGATCATGAAGCAGGGCATCATCACCATTTTGAACTCAAACACCAACACACCTTCTTCTCTGCGAAGAACTCTCTCAGCAGACATGTCCTCAAAGAACTGGCTCTCCCAGAACTCCGAAGAAGAACAACAACAGCACTTGCATGCAAAAACCATTGCTTCATCTGAAGAAGATGAAGCTGAAAGAGAGAGGCTCGAGATTTGGAGCTCCATCCAGAGGAACAAGAAGGAGGAGCAAGAGAAATCAGGAGCCTTTGACACGTGGAGCTCCATCATATCACTCAAGGGAAAAGATGAAATCTCGAAATCTCTTCCTGTTACACCTTATGTTGACCCTCATGTGAAAAGGTCCAAGAGTTCTTTGAGTGAGAAGAGCCTCGAAATCTGCACTGAGAGCCTCGGGTCCGAGACTGGCTCTGATGGCTTGCTTTTCTCTTCTTCTGAAGCAGAGGAAGAAGAGAAACTCGTAGAACCACCTTATGAAGAACAGGTTATAGAAGAAAAAGAACAAGAGTTATGCAATTATGCTTCAGTGGTGGTGGCTACAAAGAAGGCTTCGGTTTCAGCTTCGGCTTCACGAGCTTTCCCTCCACCACTTCCTTCACTCTCTCATCACCAAGCTGGTCCTTCTTCAGTAACTCACATTCGTTCCCACCGCGACAATGGAAGGTTGGTTCTCGAAGCTGTTTCTGTTCCTTCTCAGAACAATTTCAGCATCCAGCGCCAAGATGGTCGCCTTGTCCTCACTTTCTCCAATCAACAAGATGGGGAGGGGGAAGAAGAAGAACAAGAAGATGTAGCGGAGGAGTTGGAAGAAGAAGAGTGCTTTGGAGGGTTTGAGTTTGGAGAAGTTGAGGATTATGATGAGGAAGATGAAGATGAAGAAGAATACTTCTTCGGCGCGAAGCCGATGACACAGGTATCCTCTGTTGGATACCAAAAGAGTGTGTTGGAGAGAGCGTCGCCGCTGTTGTCCAGTGAGGTGACAAGTAGTGTTCATGATCAGTTGGCGTTGATGATGAATAAGAATATTAAGCCAATTGGGGTGGTGAATAGGAATCCAAAGTGGTCTTCGGAGAAGAACAAGTTCAATGAGATGACAAATTTTGATGATGTTAATGTTAATGTGGCTTCATCACTGCCTCCAAGGCCAAGGATGGCAAGGTTGATTCCATCAGCACCAGCTGTGGCTGCTGCTGCAGCTGCAGCTTCTTTCAATCTCAATGCTTATGAGTACTATTGGAGGACCAACTCTGCTACATCAAAAAAAGGTGCTACTACTAGTACAGGTACTGTTAACTACCTTAACCAACTTGACCAAGAGAAACTGAAGAAGAGCGAGGTTGTTGTCTCTGGGAACATGATGAACAAGGTTGTCTCAGGGGACCAACAACAATTGCTGGTTCTGAGAGGGAAGAATGGTGATTACTTGGTTCACAATTTCAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCCTAA 1596 0.4543 MSAAPMTNNNKVQSQVLLSSSSSSVRIEEEIMKQGIITILNSNTNTPSSLRRTLSADMSSKNWLSQNSEEEQQQHLHAKTIASSEEDEAERERLEIWSSIQRNKKEEQEKSGAFDTWSSIISLKGKDEISKSLPVTPYVDPHVKRSKSSLSEKSLEICTESLGSETGSDGLLFSSSEAEEEEKLVEPPYEEQVIEEKEQELCNYASVVVATKKASVSASASRAFPPPLPSLSHHQAGPSSVTHIRSHRDNGRLVLEAVSVPSQNNFSIQRQDGRLVLTFSNQQDGEGEEEEQEDVAEELEEEECFGGFEFGEVEDYDEEDEDEEEYFFGAKPMTQVSSVGYQKSVLERASPLLSSEVTSSVHDQLALMMNKNIKPIGVVNRNPKWSSEKNKFNEMTNFDDVNVNVASSLPPRPRMARLIPSAPAVAAAAAAASFNLNAYEYYWRTNSATSKKGATTSTGTVNYLNQLDQEKLKKSEVVVSGNMMNKVVSGDQQQLLVLRGKNGDYLVHNFKSCKDSRRSFLFWEPYCIATS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0708 531 MobiDBLite consensus disorder prediction 220 244 - -
Aed5g0708 531 MobiDBLite consensus disorder prediction 72 89 - -
Aed5g0708 531 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 29 530 - -
Aed5g0708 531 Pfam Fantastic Four meristem regulator 223 279 IPR046431 -
Aed5g0708 531 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 29 530 IPR021410 -
Aed5g0708 531 MobiDBLite consensus disorder prediction 61 89 - -
Aed5g0708 531 Coils Coil 282 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0708 Aed-Chr5 5262041 5263636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0708 - - gmx:100787948 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0708 5 5262041 5263636 Aed5g0708 5 5262041 5263636 ECH
Aed1g0976 1 10030491 10031675 Aed5g0708 5 5262041 5263636 PCT