Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0976 ATGAACATGGTGGTGCAGAAGCAGGGCATTGTGACCATTTTGGGCTCTAACCATGATGCTCCCACTTCTCTTCGACGCACTCTTTCCGCAGACATGTCTTCCAAGACATGGCTTTCTCAAAACGGCTTCTCTCCCATCAAAAAAATCGCTTCCTCCCAAGAACTTCTCTCTCACTCCCTCACAAAAGCCACGGTTGCTGACTCATCATCAGCATCCTCGTCAGAAGAAGATAACATTGAAGAAATGAAGCAAGACCGGTTCCAAATTCGGAACACAATTCAAAAGGAGCAGCATGAGGACAACAAAACAGGACATTTTGATGTGTGGAACTCAATTTTGGCCCAAAAAGCCAACGAGGAAGCCTCAAAACTAACCACCACTCTATATGTTCACCCACTTGTGAAAAGGTCAAAGAGTTGTTTGAGTGAAAAAAGTTTAGAAATATGCACGGAGAGTCTTGGATCCGAAACTGGCTCAGATGGGTTCTCTTCTTATTCACTATCTGAGACAGAGGATTCAGAAGAAGAAAAAGAAGAGGAGGAAGAGAGTGTGGAAATTTCACACGAGGAGGATTTTAAAGTGCCAAAATACAACTATGGTGTGAAAAAGTCCTTGCCTCGTTCTTTCCCTCCTCCACTCCCTTCACTTCACATGTGTTCCCACCGTGACAACGGAAGGTTGTTCCTACAAGCTGTACCTGTTCCTTCACAGAACAACTTTTGTGCTCAACGAGAAAATGGTCGCCTTGTCCTCTCTTTTGCTGACGTGGAGGTAGCTGAAGAAGAAGAAGAAGAAGAGTTTGATGACGAGGCAGAGGAAGTGGAGATTGAGAGTGTAATGGAGGAAGCACCCATGTTGTCTAGTGGGATTAACTTAGCATTAATGCTGAATAAGCCAACTGGGTTTGGTGATGCCAATAACAAGAGTCCAAAGTGGTCAGAGAAGTTCAACGATGTGGTGCAAGTGCAACAACATAGTCCACTGCCACCAAGGCCAAGGCAACAACATAGTATTCATAAAAAGGCTTTCAATGCTTATGAATACTATTGGAGAACCAAGCCTACAGCAAAACCTGCTCATGCTCCTGCTTCTAACAATTACTCGTCCTTGGAGAACAGTTTGAAGAGTTGCAAGGATTCTAGGAGGTCTTTTCTGTTCTGGGAACCGTATTGCATTGCTACCTGA 1185 0.443 MNMVVQKQGIVTILGSNHDAPTSLRRTLSADMSSKTWLSQNGFSPIKKIASSQELLSHSLTKATVADSSSASSSEEDNIEEMKQDRFQIRNTIQKEQHEDNKTGHFDVWNSILAQKANEEASKLTTTLYVHPLVKRSKSCLSEKSLEICTESLGSETGSDGFSSYSLSETEDSEEEKEEEEESVEISHEEDFKVPKYNYGVKKSLPRSFPPPLPSLHMCSHRDNGRLFLQAVPVPSQNNFCAQRENGRLVLSFADVEVAEEEEEEEFDDEAEEVEIESVMEEAPMLSSGINLALMLNKPTGFGDANNKSPKWSEKFNDVVQVQQHSPLPPRPRQQHSIHKKAFNAYEYYWRTKPTAKPAHAPASNNYSSLENSLKSCKDSRRSFLFWEPYCIAT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0976 394 Pfam Fantastic Four meristem regulator 208 253 IPR046431 -
Aed1g0976 394 Coils Coil 79 99 - -
Aed1g0976 394 MobiDBLite consensus disorder prediction 152 189 - -
Aed1g0976 394 Coils Coil 170 190 - -
Aed1g0976 394 MobiDBLite consensus disorder prediction 152 168 - -
Aed1g0976 394 Coils Coil 257 277 - -
Aed1g0976 394 MobiDBLite consensus disorder prediction 169 186 - -
Aed1g0976 394 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 6 394 - -
Aed1g0976 394 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 6 394 IPR021410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0976 Aed-Chr1 10030491 10031675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0976 - - gmx:112998576 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0976 1 10030491 10031675 Aed1g0976 1 10030491 10031675 ECH
Aed1g0976 1 10030491 10031675 Aed5g0708 5 5262041 5263636 PCT