Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0622 ATGGGGACTTTAAATCACTATGTGATTGTTAAGTTCAAGGATGGTGTGGCAGTTGATGAAATCATTCAAGGGTTGGAGAAGATGGTCTCTGGCATTGACCATGTCAAGTCCTTTGAATGGGGAAAGGACATTGAAAGCCATGATATGCTAAGACAAGGTTTTACTCATGCTTTCTTAATGACATTCAATGGGAAAGAGGAGTTCAACGTATTTCAGACTCACCCAAATCATCTTGAGTTCGCGGGAGTGTTTTCAGCTGCTATTGAGAAGATTGTGGTGCTGGATTTCCCATCTAACCTTGTCAAAGCACCAGCTGCATGA 321 0.4206 MGTLNHYVIVKFKDGVAVDEIIQGLEKMVSGIDHVKSFEWGKDIESHDMLRQGFTHAFLMTFNGKEEFNVFQTHPNHLEFAGVFSAAIEKIVVLDFPSNLVKAPAA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0622 106 PANTHER EXPRESSED PROTEIN 1 105 - -
Aed5g0622 106 SMART Dabb_2 4 98 IPR013097 -
Aed5g0622 106 Gene3D - 2 106 - -
Aed5g0622 106 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Aed5g0622 106 PANTHER - 1 105 IPR044662 -
Aed5g0622 106 Pfam Stress responsive A/B Barrel Domain 4 97 IPR013097 -
Aed5g0622 106 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0622 Aed-Chr5 4549617 4550515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0622 - - gmx:100306003 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0622 5 4549617 4550515 Aed5g0622 5 4549617 4550515 ECH
Aed1g1041 1 10430924 10432546 Aed5g0622 5 4549617 4550515 PCT