Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1041 ATGGGGGATTTCAAACACTTTGTAATTGTTAAGTTCAAGGAAGGTGTGGCAGTTGATGAGCTCACAAAAGGGATGGAAAAGTTGGTCTCGGAGATTGATGCTGTCAAGTCTTTTGAATGGGGACAGGACATTGAAAGTCTAGATGTGTTGAGACAAGGTTTCACTCATGCATTCTTGATGACATTCAACAAGAAAGAAGACTTTGTTGCATTTCAGAGCCACCCAAATCATGTCGAGTTCTCCACAAAATTTTCAGCAGCTATAGAGAATATTGTGCTGCTGGATTTCCCATCTGCTCTTGTCAAGGCCCCAGCATGA 318 0.4214 MGDFKHFVIVKFKEGVAVDELTKGMEKLVSEIDAVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFVAFQSHPNHVEFSTKFSAAIENIVLLDFPSALVKAPA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1041 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Aed1g1041 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Aed1g1041 105 SUPERFAMILY Dimeric alpha+beta barrel 3 97 IPR011008 -
Aed1g1041 105 PANTHER EXPRESSED PROTEIN 1 104 - -
Aed1g1041 105 PANTHER - 1 104 IPR044662 -
Aed1g1041 105 Gene3D - 2 105 - -
Aed1g1041 105 SMART Dabb_2 4 98 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1041 Aed-Chr1 10430924 10432546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1041 - - gmx:100306664 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1041 1 10430924 10432546 Aed1g1041 1 10430924 10432546 ECH
Aed1g1041 1 10430924 10432546 Aed5g0622 5 4549617 4550515 PCT