Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0619 ATGAGAGACATAGTTTCTTGCTTCAGCGAGAACGCAGTGAACGTGTCTCACTCCTCAATCTCGTGTTCTTCCTACTCAAACAACGCGTGCATCACTCCCTCTTCCTCCTCCATTGCTGCTGCAACTGCAACAACACCCTCCACCCAAAACTCAATCTCCAGCGTCTACAAACTAGTCCTCTCCACGCTGAAGCAACTTCACATCACAGTGACATGGTGTAGGAGCCACTCCAACCAAGGACTCACCATAACCTTCAACGACGAGGACCCTCCACCTTTCAGACTCAACACCAATTCACGCTTCTTCCGAAAGAAAAAAGGCACCAAAATCCTCGAGCCCTCTTCTTCTTCTTCTTCTTCTTCATCGTCCAAGGTAGAAATCTTGTGGGATCTCTCAAGCGCCAAGTACGATTCCGGACCCGAACCTGTTCAAGGCTTCCACGTTGTCATCATCATTGACTCCGAAATAGCCTTGGTTCTCGGCGACACTGCTGAAGAAACTCTTTCCAAGAGGCAAAATTTCAAAACTAAAAACAAGGTCTCACTCTTGTCACGGAGAGAACACTGTTCTGGGAACACGCTTTACACCACCAAGGCTCAGTTCTGCGACACTGGCACGTGGCACGATCTTATTATAAGATGTAGTGTGGAGAAGGAGAATGAAGGGTTGTTCAAGTCACCGGCTTTGTGCGTTTGCATTGATAACAAGACTGTGATTCGCGTGAAGAGGCTGCAGTGGAATTTTAGGGGGAACCAGACCATTTTTGTTGATGGCTTGCTTGTGGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAACCCTTCTTCTTCTTCTGGGTATGCGGTGTTCATGTTCAGAACTAGAACTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACACAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA 966 0.4679 MRDIVSCFSENAVNVSHSSISCSSYSNNACITPSSSSIAAATATTPSTQNSISSVYKLVLSTLKQLHITVTWCRSHSNQGLTITFNDEDPPPFRLNTNSRFFRKKKGTKILEPSSSSSSSSSSKVEILWDLSSAKYDSGPEPVQGFHVVIIIDSEIALVLGDTAEETLSKRQNFKTKNKVSLLSRREHCSGNTLYTTKAQFCDTGTWHDLIIRCSVEKENEGLFKSPALCVCIDNKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSSGYAVFMFRTRTGMDSRLWLEEKNAHKDKDRVEFSLLIYACKTS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0619 321 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Aed5g0619 321 Pfam Plant protein of unknown function (DUF868) 47 319 IPR008586 -
Aed5g0619 321 PANTHER DUF868 FAMILY PROTEIN 1 320 - -
Aed5g0619 321 PANTHER EXPRESSED PROTEIN 1 320 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0619 Aed-Chr5 4535005 4535970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0619 1 320 EF-hand Containing Proteins AT5G28150 33.746 6.59e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0619 - - gmx:100794621 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0619 5 4535005 4535970 Aed5g0619 5 4535005 4535970 ECH
Aed1g1044 1 10445756 10446676 Aed5g0619 5 4535005 4535970 PCT