Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1044 ATGAACATGTCAGATATAATATCTTGTTTCAACGAGAACGCAGTGAATGTGTCACACTCCTCAATCTCATGTTCTAGCTACTCAAACAACGCGTGCATATCTCCCAGTGTTACACCTTCAACTCAAAATTCAGTGTCCTCTGTCTACAAAACAACCCTCTCAAACCAAAAGCAGCTTCTGATCACAGTGACGTGGTGCAAGAGCCACACCAACCAAGGACTCACCATAACCTTCGGCGAAGAGAGTGACCCTTTGGCACCATCTTTCAGACTCAACACAAATTCACGTTTTTTCAGGAAAAAAAAAGGAAGCAAAGTGTTGGAATGTTCCGAAGACTCATCAAAAGTTGAAGTCTTCTGGGACCTCTCAAAGGCCAAGTACGAAACTGGCCCTGAACCCGTTGAAGGGTTCTACGTGGCGATTCTCGTCGATGATGCAGAAATAGGCCTAGTTCTCGGCGAAGACGTGGCCAAGAAGTTCAAAGCAAGAACCCATTTGGGAAACGTTTCACTGTTATCACGGCGTGAGCATTGTTCTGGGAACAACGCGGTTTACGCCACCAAGGCTCAGTTCTGCGACACTGGAACTTGGCACGACATTTTGATCAGATGCAGTGGCGAAAATGAAGGACTCAAGGCTCCTGTGTTGTCTGTTTGCATTGATAAGAAGACCGTGATCCGTGTCAAGAGGCTGCAGTGGAATTTTAGGGGAAACCAAACCATTTTCGTTGATGGCTTGCTTGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGCTATGCTGTGTTCATGTTCAGAACTAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAGAAGATTGCACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGAACACATGA 921 0.4506 MNMSDIISCFNENAVNVSHSSISCSSYSNNACISPSVTPSTQNSVSSVYKTTLSNQKQLLITVTWCKSHTNQGLTITFGEESDPLAPSFRLNTNSRFFRKKKGSKVLECSEDSSKVEVFWDLSKAKYETGPEPVEGFYVAILVDDAEIGLVLGEDVAKKFKARTHLGNVSLLSRREHCSGNNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKNT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1044 306 PANTHER EXPRESSED PROTEIN 3 305 IPR008586 -
Aed1g1044 306 PANTHER DUF868 FAMILY PROTEIN 3 305 - -
Aed1g1044 306 Pfam Plant protein of unknown function (DUF868) 40 304 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1044 Aed-Chr1 10445756 10446676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1044 3 305 EF-hand Containing Proteins AT5G28150 38.710 4.87e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1044 - - gmx:100798692 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1044 1 10445756 10446676 Aed1g1044 1 10445756 10446676 ECH
Aed1g1044 1 10445756 10446676 Aed5g0619 5 4535005 4535970 PCT