Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0605 ATGGCGCGAGTGGATCTGGACGGGAAACCCATCAAGGCGCTGACGATCTGCATGATCGGCGCTGGCGGGTTCATCGGCTCGCATCTCTGCGAGAAGCTCATGTCCGAAACCCCTCACACGGTCCTCGCCTTGGACGTTTACAACGACAAGATCAAGCACCTTCTCGAACCCGACTCGCACCCCTGGTCCGGTCGCATCAGCTTCCACCGCCTCAACATCAAACACGATTCTCGCCTTGAAGGCCTCATCAAGATGGCAGATCTCACGATTAATCTGGCTGCGATTTGCACTCCCGCGGATTACAACACGCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGCGAAATACTGTTCCGAGAACAACAAGCGTCTTATCCATTTCTCCACTTGCGAAGTGTACGGTAAAACGATTGGAGCTTTTCTTCCCAAAGATAGTCCTCTTCGCAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAGTCTCCTTGCATTTTCGGTTCTATTGAAAAGCAGAGGTGGTCTTATGCCTGTGCAAAACAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTGAGGCCATTTAATTGGATTGGACCTCGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAAGGAGTTCCTCGTGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGGGAGCCCCTCAAGCTCGTGGACGGTGGCGAGTCCCAGAGAACCTTTATTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGGGCCAATGGCCACATATTTAATGTGGGTAACCCAAACAATGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTGAGTGGAGAAAAATCTCCTGAAACACCTACAATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACTATAATAAACAAGCAACTTGGATGGAATCCTAAGACTTCACTTTGGGACCTGCTTGAGTCCACTCTGACCTATCAACACAGGACATATGCTGAAGCCATCAAGAAAGTCATTGCAAAACCCGTTGCAAGTTAA 1158 0.4732 MARVDLDGKPIKALTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPDSHPWSGRISFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVAKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEKSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0605 385 PANTHER - 1 384 - -
Aed5g0605 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Aed5g0605 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 368 IPR036291 -
Aed5g0605 385 Gene3D - 14 376 - -
Aed5g0605 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
Aed5g0605 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0605 Aed-Chr5 4403410 4406463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0605 12 356 Miscellaneous Gene Families AT4G00110 21.081 5.99e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0605 K12449 - gmx:102667779 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0605 5 4403410 4406463 Aed5g0605 5 4403410 4406463 ECH
Aed1g1064 1 10575708 10578527 Aed5g0605 5 4403410 4406463 PCT