Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1064 ATGGCTTCGTCGGCGCGAGTAGATCTGGACGGTAAGCCCATAAAGCCCATCACCATATGCATGATCGGCGCCGGTGGCTTCATCGGGTCACACCTCTGCGAGAAGCTCATGTCGGAAACTCCTCACACCGTCCTCGCCTTGGATGTCTACAACGACAAGATCAAACACCTCCTCGAACCCGACACGCTCCCTTGGAACGGTCGCATCCAATTCCACCGCCTCAACATCAAGCACGATTCTCGTCTCGAAGGCCTCATCAAAATCGCAGATCTGACCATTAATCTGGCTGCTATCTGCACTCCCGCGGATTACAACACGCGCCCTCTCGACACCATTTACAGCAACTTCATCGACGCGCTTCCTGTGGTCAAGTACTGTTCCGAGAACAACAAGCGTCTCATTCATTTCTCTACCTGTGAAGTCTATGGCAAAACCATTGGAAGCTTTCTCCCCAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTATGTACTTAAGGAGGATGAGTCTCCTTGTATTTTTGGTTCAATTGAAAAGCAGAGATGGTCCTATGCCTGTGCTAAGCAGTTGATTGAGAGGCTTGTTTATGCTGAGGGTGCTGAAAATGGCTTGGAATTCACAATTGTGAGGCCTTTTAACTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTCGCATGCTTTAGCAACAATCTCCTCCGCGGAGAGCCCCTCAAGCTTGTGGATGGTGGCCAATCCCAGAGGACTTTTGTGTATATTAACGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGGGCCAATGGACATATTTTTAATGTGGGAAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACTCAGGTTTATTCAAAGGTAAGTAAAGAAGCACCTCTGGAAAAACCTACTATTGATGTGAGCTCCAAAGAATTTTATGGTGAGGGGTATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAATAGGCAACTTGGCTGGAATCCTAAGACCTCACTTTGGGACTTGCTTGAATCCACTCTCACCTATCAGCACAGGACTTATGCTGAAGCCATTAAGAAAGTCATTGCAAAGCCAGTGGCAAGTTAA 1167 0.4704 MASSARVDLDGKPIKPITICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPDTLPWNGRIQFHRLNIKHDSRLEGLIKIADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYINDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSKEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1064 388 PANTHER - 5 387 - -
Aed1g1064 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 371 IPR036291 -
Aed1g1064 388 Pfam NAD dependent epimerase/dehydratase family 19 289 IPR001509 -
Aed1g1064 388 Gene3D - 17 379 - -
Aed1g1064 388 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 5 387 - -
Aed1g1064 388 CDD Arna_like_SDR_e 18 373 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1064 Aed-Chr1 10575708 10578527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1064 3 383 Miscellaneous Gene Families AT1G02000 21.836 1.77e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1064 K12449 - gmx:100792879 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1064 1 10575708 10578527 Aed1g1064 1 10575708 10578527 ECH
Aed1g1064 1 10575708 10578527 Aed5g0605 5 4403410 4406463 PCT