Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0543 ATGGCGAACGACACTAGTTCCGGTCGCGCCGCGGAGAAAGGACCGATAACGAGGTCTTCGAGAGACGCATTGTCGAAGAAAGCGGTTGCGAGCGCTTCCTCCACCACTCCAAATCGCAAGTCGGAGCGGCTCGAGAAGCGGACGCCGCCGTCGCTCGCGGTGAGGATGGATCAGAAGAATAAGAAGATGCCGAGTCCGTTGCGGAGATCCGAGAGAACAAGGAACGCTTCTCCTTCGGCTTCGAAATCCAAGAGTTCAAGTTCGGGTTCGGTTTTGGAGAAGCATTGCAGTGGGAAACAGTTGAAGTTTGAGGCTAGCGGTGACGAGGATAATAATGATGATGAGGAGGAGGAACGTGGTGCGGAAGCTTCTTCGAGACTTAGACCTAGAAGGATGACTGCGCGCGAGTATCGTGCTCTCTTTGTTAAACCTAAGAGAGATTGCCATGAGAAGACAAATGGGATGGATAGGTCAACTGAAGGAGATTGCCATGAGAAGACAAATGCAATGGATAGGTCAACTCAAGAAGGTGAGGAGTTAATTGAAAATGATTGCCATGAGAAGACAAATGGGATGGATAGGTCAACTCAAGAAGATTTCCATGAGAAGACAAATGGGGTGGATAGGTCGGCTCAGGAAGGTGATGACAGGGGTAGGGACAAGATTGATGGGTGCCTTAAAGAGAGTTGTTTAAATTCTGCCAAGGATGATAAGGATATTTTGCCACCTGAGGATGCCAATGGTAAAGAGATGAGAGCTGAGCCTAAGTTGAGTTGGCCTGTGAAAGAACTATTAGATAATAATGTGAATGCAAATTCTTTGGTACCGTCTAATGAAGCAACTTGTGAGCCCAGTGGGGCATCTGAAAGGGTTCAGTCTGAATTGTGCAAAGAGGAGACATTGCAGAACTTAGGGTCAAGGGATTCTGTATCAAATGAAAATTTGATTAGGAAATGTGTTGAGCATGATAAGGGTGAAAAAACGATATTTTCCAAGAGAAAAAGAAATATGGTGGACATGCATTCAGATGCTTCTGCTGTGTTGGTTGACAATGACAACAGCCACTTGATTGAGGATGCTCGCCCGTCAAGGATATGTGGCAATGTTGTGGAGACCAGTGGGTCATGTTCCAAAAGGATAAGGAGTATCTCCTTATCAGATGTGAAAAGGGATGGGAGGAAAACCGCCATTAATGTTGATCAGCCTTCTTCAAAATCTAATGTTGGAAATTTATCAACTAGGAACAAGGAAGACTCAGAAAGACCTCAAGGGAACACTGTTGAAACTGAGAAAATACGGAAACAGCAGAGGAGCTTACATCTTTTACTGAAGCCAGAGATAGCTAATCTTTGTGAAATTCTGTGTCTTCCGGACAATGTCAAGAGCATGGTTGAAAATTGTCTTGAATATACTATGGACAATTACCAAATCTGTACAGAACCAGTGTCAATATTACAGGCTTTTCAACTATCTCTGTGTTGGACTGCTGCTTCTTTGCTAAATCACAAACTTGACTTTGAAGCTTCCCTTGTGCTTGCTAAGCAGAACTTAAATTTTGACTGCAAGAAAGAAGTGGTGGATGAAATTAATTCAAGACTCTGGGATCTGAAGGAAAATTTTTTATTACTCACAGAAAACTCTAATGTTGCCAGCTATCCAAAAGCTTCTGAATCATCATCAAATGGGGTTTATTCATATATGGAAGTGACACCAGAGGTTGAATTGGTAAATAATGATAATTCTAAAAATATTAAAAATGTTCAGAACCGTAAAAGCCAGTGGAACAAGCTACTTCTGACACAACTGGAAGAGAAGAAAAACTTGGAAAAAGATATTGAAAATGATAACACTGAATTTAGGAGAATGTACCGAATACACTGGGCAGCTATTCAATCATGTTCTTCCAATGATGTAACGAAAGAACAAAAGCTCAAGGTTTTCAACGTTGAATACTTGAAAAGAATGAGAGAATTGGAAAGGCAGCATGAAATATGTCTCAAGGATCTTGAGGCCAAGCAATTAAAAACAAGGCTGATGTTCCAAGAGTCTTCGGCACCAGATGAATTGTTGAACCCAGTTGCTTCAAACGAACTTGGGCCTAAGGTTGACTCCTTGCAGACTTGTGATCAAGCCCAGCATCCTAATGCCCTGAAAGCCCCTGCTTCTGATTATGTTGCTGAAGGAGAGGGTTTCAATGATATAGTTGAAGTAATGACAAGGACTGGAACTGGGATTGGATTATCTGAAGCTCCTGATGCCAATGCCTCTGTGGTTGTACCATGCAGTAGCACAGTTGAACTGCAAACTCCTCTGGTCAAAGTCAAACATGCTGATGCTAATGAGATGGACTTAGTGGCTTCAAAAGATGGACCAGTATCTGGCAATAAGTGCAATAATATTACTGAAAATGAATATGACAGTCAAGGAAATATTATCTCTAAGCATTCCAATTCCAGCGAACAATGTTCTGATGGAGCTATTAGCTTGCCAGACAAGGGGGAGTGTGTAAGTCGTGTATCTCGTGATTTTGGGCAGGAAGCTATAACACAAGTTCTGCCTTCATCTAATGAAGAGATATGTGATGAGAAAACATTAGATGTTCCTAGTGGAGAGGTGGCTCCTTCAGTGTGTAACACAAGCTGTTCAAATGGTGATCATGTTGAAATTCCTTCTTCTAGCCAAGGGGGACTTGATGGGACTATACTGAGCAATCCTGTTTGTGGTTCATCAATAGAAGTTGAGGCTAATGGTTCCAATGATGGTGCAAAGAATATGGCCCCCTTGAATTCTCAATCATCTGAAGAACATATCCCAAGTGTAAATACCATGTTCACATTAAATTGTGAGAATGCTGCACAAATCCATGAGGCTGATGACAATAATGGTTCAAATAATGCTGAAACTCTGAACTCATCTTTGTTTGATGAAATAATTTCCTCCTTGAATTTGAAATCACCTCAAGGCCATGCCAGTTATGAAAATTCCAAGTGCATGCAAAATTGTCAGAATTTTGGACAGATCCTTGAGGATGCTGATGGCAATGGTTCAAATAATGTCATTCTGAATTCACCTTTGATTGATGAGAGAAATGCTGATAGGACCACAGTATTAAATAGAGATGCACATGTGGGAATGCTTGAGAGTGTCAATTTCACTTCTTCATCCACAGAGCAATTATCTGGAGGTGCAGTAGATGTCTCAGTTTTAGATAATGTATTGTCAAGAATACGTGAAGCTGATAGCCCCAGTAATAGCTCAGATGCTGATGCTATAATTCTTTCAAATCAACCTTTGTTAGAGAAACAAAATCATGATGAAGTTTCATCAAGCATACCTGTTGGAAAATTTCCAGTTGAAGTGTCAGACACTTGTCATGAGAGGATCACTGTAAATGTATTAGACAAGGAGGAAGCTGTGGGAAGGCTTGGCACAGTCAATTGTACTGATTATCCTGGCAATGTTATTCCTCTGAATTCTTCATCCATGGATCAAATTTCTAATGGAGGTTCATTATTAGATGGAGATTTATCATCAGGGCCTTGTACTAGTAGCCCAAGCAATGGTCAGACTGTACCTGATGAACAAATTCCTGTCTTAGTGCCAGAAAATAGCCATGAAGTGGCTGAATGTCAATTAAAAGACAGTGCAGTGGTGGATAAAAATGCCACATCTGACCAGCAGGACGGAGTATGTAGAATGATGACAGAAAACAGTTTATCCCAGGAAACTTCAGTATCGAGACCAGTTGATGATCTCATGGAGCCTCTAGAACAAGTGCAGCCATTATCATCTGTACATTCTCCATCTAACCCGGATACTGCTAGAGAAATGCAGAACACTTTGAGTTCTGTTGATATTGTACGAGCTAATCAATCCATTAATGATTCACTGGTCATGGAGTCTCCAGAGCAGGAGGGGCAATTACCTTCTGCAGGTTTCCTTTCTTCCAACCAGGACCTATGTAATTTACCTTTGCTGACCGGAACTGAAGACCAGCCATCCAATGAAAATGATCTCCCCAACCACATTTCTGAGACGTCAATTGAGATTCAAAATCAAGTTGTGCAACATGCCTCAAATTTGGACCAGCAGGAAGGAGTATGTAGAACCATGACAGAAAACAGTTTGTCCCTGGAGACTCCAGTAACGAGACCAGTTGATGATCTCATGACGCCTCTGGAACAAGTGCACCTATTATCATCTGTAGAGTCTCCACCTGACCAGGATACTGCTAGAGAAATGCAGAACATTTTGGTATCTAGTTCTGTTGATATTGTACCAGCTAACCAATCCATTAATGGTTCACTGGTCATGGAGCCTTCAGAGCAGGGGGGGCAATTACCTTCTGCTGGTATCCTTTCTTCCAACCGGGACCTAGCTAACTTGCCTTTTGTGACTGGAACTGAAGACCAGCCATCCAATGAAGAAGATGGTCTCCCGAACCACATTCCCGATACATCAATTGAGATTGAAAACCAAGCTGTTGTGCAATGTGTCTCAAATGTGGAACTTGACTTATGTTCACGTCAAGTTGTACATTCAACCTCAAATATGGACCTTGATTCACTTCTTCCTGGTGGAATCAGACTGCAGTCTTTAGACACAAGAAATTTGTCAACTCTCACAGAGATTAATAACCATCCTATACAACCTGCAAGCCAATCAGCTTCCAGGATTATTCAACATTTGTGCCTTGATCCACTTACCAATGAATTGGAAAGACTACGTATACTGACAGACCAAAATATGAAAGAATATGAAAATAAGAAACTGCAGTTAAAATGTGATTTTGAGAAGGAACTCGAGGAACTTTACAGGAAGTATGACATTAAACGTAAGGAGATTGAGGTTGAATTTCAGAATATAAGGAAGAGCATGGATGCACGACAACATATAGTTTTTGCAAATAAGATATTGGCTGAGGCTTTCAGGGCTAAATCCATGGATCTTAAAGTATCTGGTGCATCAAGAATGCAGCAAGATGGAGGTTTTTCACAGCAATTATTTCAGATTGCAAATCAGCAAAATGCCACTCGGCCCTGTTTGTCTGTTGGTCCATCTTCTTGTGGACCTCCTGCAGCCAGCTTGCAGAATTCCTACGCTACAACCACATCTCAGACTATGGTACCAGCCACTTACAGTACACCAGGAACTTTCTCCAGTGTTTCTCCAAGACTACCTCATATCAACTCCCTCTCTTCGCCCTTGGGAAATGTTCAAACTGCGGGGGAAATACGTGCCCCTGCACCACATCTCCAGCCTTATAGACCCCCAACATCCATCCCAACCTCCACTCCCTGTACAGTTCCGCACGGGAGGCCAAGTCAGCCTGCACCCGTTAATATTCCTGTAACTTCTCTTCCCTTTTCTCACCGGACACCGCGGCCAATGCCGGCAAACTTTCCTCATAGGGGGCATTGGCCTGTGAGTACAGGTGGGTCACCCGCACCCAATTTATCTGCCATGAATTCTCGCACTGATACTAATGGTCAACCTGGTACAAATCTGCCAAATGTTAGGCCTAATATGCCAGATTTGCCTTCATTGAAATTTAAATTTGGCAGCAAAAGTCGTAGCACGCCGGCTACATCACCTGATGTAGTCTGTTTGTCAGATGATGAATGA 5625 0.4236 MANDTSSGRAAEKGPITRSSRDALSKKAVASASSTTPNRKSERLEKRTPPSLAVRMDQKNKKMPSPLRRSERTRNASPSASKSKSSSSGSVLEKHCSGKQLKFEASGDEDNNDDEEEERGAEASSRLRPRRMTAREYRALFVKPKRDCHEKTNGMDRSTEGDCHEKTNAMDRSTQEGEELIENDCHEKTNGMDRSTQEDFHEKTNGVDRSAQEGDDRGRDKIDGCLKESCLNSAKDDKDILPPEDANGKEMRAEPKLSWPVKELLDNNVNANSLVPSNEATCEPSGASERVQSELCKEETLQNLGSRDSVSNENLIRKCVEHDKGEKTIFSKRKRNMVDMHSDASAVLVDNDNSHLIEDARPSRICGNVVETSGSCSKRIRSISLSDVKRDGRKTAINVDQPSSKSNVGNLSTRNKEDSERPQGNTVETEKIRKQQRSLHLLLKPEIANLCEILCLPDNVKSMVENCLEYTMDNYQICTEPVSILQAFQLSLCWTAASLLNHKLDFEASLVLAKQNLNFDCKKEVVDEINSRLWDLKENFLLLTENSNVASYPKASESSSNGVYSYMEVTPEVELVNNDNSKNIKNVQNRKSQWNKLLLTQLEEKKNLEKDIENDNTEFRRMYRIHWAAIQSCSSNDVTKEQKLKVFNVEYLKRMRELERQHEICLKDLEAKQLKTRLMFQESSAPDELLNPVASNELGPKVDSLQTCDQAQHPNALKAPASDYVAEGEGFNDIVEVMTRTGTGIGLSEAPDANASVVVPCSSTVELQTPLVKVKHADANEMDLVASKDGPVSGNKCNNITENEYDSQGNIISKHSNSSEQCSDGAISLPDKGECVSRVSRDFGQEAITQVLPSSNEEICDEKTLDVPSGEVAPSVCNTSCSNGDHVEIPSSSQGGLDGTILSNPVCGSSIEVEANGSNDGAKNMAPLNSQSSEEHIPSVNTMFTLNCENAAQIHEADDNNGSNNAETLNSSLFDEIISSLNLKSPQGHASYENSKCMQNCQNFGQILEDADGNGSNNVILNSPLIDERNADRTTVLNRDAHVGMLESVNFTSSSTEQLSGGAVDVSVLDNVLSRIREADSPSNSSDADAIILSNQPLLEKQNHDEVSSSIPVGKFPVEVSDTCHERITVNVLDKEEAVGRLGTVNCTDYPGNVIPLNSSSMDQISNGGSLLDGDLSSGPCTSSPSNGQTVPDEQIPVLVPENSHEVAECQLKDSAVVDKNATSDQQDGVCRMMTENSLSQETSVSRPVDDLMEPLEQVQPLSSVHSPSNPDTAREMQNTLSSVDIVRANQSINDSLVMESPEQEGQLPSAGFLSSNQDLCNLPLLTGTEDQPSNENDLPNHISETSIEIQNQVVQHASNLDQQEGVCRTMTENSLSLETPVTRPVDDLMTPLEQVHLLSSVESPPDQDTAREMQNILVSSSVDIVPANQSINGSLVMEPSEQGGQLPSAGILSSNRDLANLPFVTGTEDQPSNEEDGLPNHIPDTSIEIENQAVVQCVSNVELDLCSRQVVHSTSNMDLDSLLPGGIRLQSLDTRNLSTLTEINNHPIQPASQSASRIIQHLCLDPLTNELERLRILTDQNMKEYENKKLQLKCDFEKELEELYRKYDIKRKEIEVEFQNIRKSMDARQHIVFANKILAEAFRAKSMDLKVSGASRMQQDGGFSQQLFQIANQQNATRPCLSVGPSSCGPPAASLQNSYATTTSQTMVPATYSTPGTFSSVSPRLPHINSLSSPLGNVQTAGEIRAPAPHLQPYRPPTSIPTSTPCTVPHGRPSQPAPVNIPVTSLPFSHRTPRPMPANFPHRGHWPVSTGGSPAPNLSAMNSRTDTNGQPGTNLPNVRPNMPDLPSLKFKFGSKSRSTPATSPDVVCLSDDE 1874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0543 1874 PANTHER - 1 835 - -
Aed5g0543 1874 PANTHER - 1362 1411 - -
Aed5g0543 1874 Gene3D - 1565 1646 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 1 133 - -
Aed5g0543 1874 PANTHER HELICASE PROTEIN MOM1 1362 1411 IPR039322 GO:0031507
Aed5g0543 1874 MobiDBLite consensus disorder prediction 1813 1838 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 397 413 - -
Aed5g0543 1874 PANTHER - 855 1273 - -
Aed5g0543 1874 Coils Coil 1583 1618 - -
Aed5g0543 1874 PANTHER - 1415 1874 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 24 38 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 393 431 - -
Aed5g0543 1874 PANTHER - 1278 1361 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 119 133 - -
Aed5g0543 1874 Coils Coil 598 618 - -
Aed5g0543 1874 PANTHER HELICASE PROTEIN MOM1 1 835 IPR039322 GO:0031507
Aed5g0543 1874 MobiDBLite consensus disorder prediction 414 431 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 1805 1874 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 1166 1193 - -
Aed5g0543 1874 Coils Coil 652 675 - -
Aed5g0543 1874 MobiDBLite consensus disorder prediction 148 222 - -
Aed5g0543 1874 PANTHER HELICASE PROTEIN MOM1 1415 1874 IPR039322 GO:0031507
Aed5g0543 1874 MobiDBLite consensus disorder prediction 70 94 - -
Aed5g0543 1874 PANTHER HELICASE PROTEIN MOM1 855 1273 IPR039322 GO:0031507
Aed5g0543 1874 PANTHER HELICASE PROTEIN MOM1 1278 1361 IPR039322 GO:0031507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0543 Aed-Chr5 3966063 3978199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0543 - - gmx:100792516 2742.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1111 1 10931640 10947160 Aed5g0543 5 3966063 3978199 PCT