Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1111 ATGGTAAATAGTACTCGTTCTAGTCACAGCACTAAGGATGAGGAAAATAGTAACAGGAGGGTGACGCGAAATAGTGAGAAGGAAAAAATCAAATTACATCCTAATGTATCAGATACAACTGGTGTCAGAAGGTCCCCTAGAGAGACACCATCAAAGAAGATAATTCCTATCTCTTCTTCAAGTACTCGTAAGTCTGTGCGACTTGAAAAGAGCGCACCACCAGCTCCTGCTGATAAAAGGAATTCTGAAAGGGTTGAAAAAATGATGCCAAGTCCTTTGAGAAGATCTGGAAGAACTAGGAGTCAGTCTTCTACCAGCTATTCTGATTCTAAAAGCTCAGGGTCATTGAGTTCAAACCCTAAGCCACAAAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCTAAGGAAGTAAATGCAAATGAGGTACATGATCTGGAAACACCCCAGGTTAAAGTAAAGGGAATGACTGCTCGTATGTATCGGTCTCTTTTTCAATTACCAAAGGAAGAGCCTAATAGGGTTGATAAGTCAAATCAAGGTGGCAACAATGGTGGAGGCAAGGTTGATGAGTGCTTTAAAGAGCGTCATTCTGATTGTGAAGAAATCTCCAAGAATGGTGCGCTACCATCTGAAAATGGAAAATCAAAAGAGATGAGAGTTGACACTGGGTTGAGTGGGCATGTAAAAGGTCTGGCAAAAAATATAGTAATTCTAGGTTTGTTGGCACCATCTAATGTTGCTATACCATCTGAAAATGGCAAATCAAAAGAGATGAGAGTTGACACTGGGTTGAGTGGGCCTGTGAAAGATCTGGTAGAAGATACCATGACTTTAGGTTCATTGGCACCATCTAATGCTGCAACTTATGAGACTGGTTTGGCACCTGAAAGCATTCACCCTGATTACTGCACAGAGGATATGTTGCAGATGTTAGTGTCAAGCAATTCCATATTGGATGAAGATTTAATCAGGAACAGTGTTGGGAATGATAGAGGTGAAATTTTGATACCTTCTAAGAGCAAGGAAATCACTGTGGATGTGGATTCAAATGTTTCTGCCATGTTGGCAAAGGGTGACAACTGCAACTTGATTCCTGATGCTACTAGCCCGTCAAGGATAGGTGGCAATATTATGGGGACTGACCGTTCATCTAATGCCACAATTTATGAGACTGGTTTGCTACCTGAAAGGGTTCAGCCTGATTGCTGCAGAGAAGAATCATTACCGTCAAGCAATTCCAAGAATGGTGTGCTACCATCTGAAGATTGCAAAGCAAAAGAGATGAGAGTTGACTCTAGGTTGAGTGTGCCTGTGAAAGATCTAGTAGAAAATACCATCACTCTAGGTTCATTGTCACCGTCTAATGCCGCAACTTATGAGACTGGTTTGGCACCTGAAAGCATTCAGCCTGATTACTGCAGAGAGAAAGGGAATTCCATATTGGATGAAGACCTAATCAGGAGCAATGTTGGGCATGATAGTAGTAGTGAAACATTGGTACCTTCTAAGAGAATGGGAATCATGGTGGACATGGATTCAGATGTTTCTGCCACATTGGCTAAGGGTGACAACTGCAACTTGGTTCCTGATAGTAGTAGCCCTTCACAACTAGGTGCCAATATTATGGGGACTGACGGGTCATGTTCCAAGCGAATAAGGTTGGATTCTAATCCTACAGTCAGTGAGTCTTGCATCCCTTCTGCAACTGAGCTTCAAGATGGAGATTATATTGATGAAAGCATGCTGCAAAAGGATTCTCAAATTGGTAATGAAAAAGAACCTGGTTTAATAACTAATTCCAATAGCAGTGTTACTCAACTGAATGAGAGGTTGTCAAGTCATATTGCAAACAGATCCAAGTCTGACTCCTTTAGGTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAGTTCTTCGCTCCTCATCAAAGGTTGATAGTGTTGGGGCTGTTCGTGATGTTCTTATTTCTACACGAAAGTGTTGTAGTCATCCCTATCTTGTTGGTCCGGAACTGAAACCTTCTCTTAACAAAGGTCTCGAACCAATTGAGTATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCAATGCTCGAGGAGTTGAGAAAAAATGATTTAAGGGTGCTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGGGTTATAGGAAATTATTTAGAAGACCTACTGCGACCAAGATTTGGTTCAGATTCGTATGAACGGATTGATAAAAATCTTTCGGCTTCCAAGAAACAAGCTGCGATGAAGAAATTTAACGATAAGAACAACAGAAGATTTGTGTTTTTGATGGAAACATGTGCTTGTGTTCCAAGCATCAAGTTGTCGTCAGTTGATTCTATAATTATATTTGATAGCGACTGGAACCCAATGAATGATATAAGATCCCTCCAGAAAATAACACTTGATTCGCAGTTTGAATTGATAAAAATATTCCGTTTATATTCATCCTTCACTGTTGAAGAAAAAGCCTTAATCCTTTCTAAGCAATGTAAGATATTTGACATCAATTTACAAAACACAAACTGGAGTACCTTTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGATGAATTGAAAGTTTTTCATGATGGTGAAATTTCTGCATCAAATGTGAAATCCTTGTTTGGACAACCACTTTTGAAAGAAGCAATGCATGAATTCTCATCCCTACTATCTAAGGATGGAGAACATATTGATTCAAGCAACTGTTCAATTTTATTGAAAGTACAGCAAAATGGGGTAGCATACCCTGGAAATTTTTCTTTGCTTGGTGAGCTAAAATTTAGGGTACTGGATAAAGAGCCACCCCAATTTTTTTGGACAAAACTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGAAACCGGAAGAAAGTTAATCTTTTTGATGGTTCAGTCAATGGGCCCAATCTTGTAAATGAAGGAGCAGCAAAGAAGCGTAGGAAAGTTAGCAACAGTATTGTTGATCATCCTTCTTCAAAATCTGAAGATGACAAGTTATCCACTGGAATCAATGCTGGAACATCTGGAGATTTATTGGGTAATGTTTCTCAATTCTTGCTTAGTTCAACTACTTGTGTTGGTAATCCATTCCATGCCAATTATGGTCCGTACTCAATATGTTTGCTTGATCAAATGACAGATAGATCTCAAGGAATTAATGTTGAATCTGAGAAAAAAGGTAGACCGCATGATGAGCAGAGGAGCTTACATCTTTTGATGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTCTTCCAGATAACGTCAAGAGCATGGCTGATAATTTTCTTGAATATGTTATGAACAATCACGATGTCAATAGGGAACCATTTTCAATATTGCAGGCTTTTCAATTATCCCTGTGTTGGACTGCAGCTTCTTTGCTAAAGCACAAACTTGACCCCATTGCTTCTCTTATACAAGATATGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTGTTCTATGTTGCGTTGTTTGAAGAAAATATTTTTATATCGTACAGGAAATTATCATGATACCGATTCTCCAAAAGCATCTGAACCATCAAACAGGGCATATTCCTGTGCAGGAGTTGCACAAGAGGTTGAATTGTTTAAAAAAGATAGGTCCAAAAGTATTAAAGAAATTCAAAAGAAGTGCAAAAAGAAGCTAAAGAAGCTACATCTTTTGCAAGAGGAAGAGAAGCAAAGGTTGAGAGCGGCTATTGAGGAAGAAAAGGCTAAATTTGAGGAAAAGTACAAAATAGAGTCTGCTGTTATTCGATCCTGCTCTCCCAATGATGTTACAAGAATGGAAAAGCTCAGGGTTTTGAATATTGAATATGAAAAAGGAATTGAAGAACTAAAATACCAGCATGATACATGTCTCAAGGATCTTGAGGACAAGCAATTAGTTGAAATACAGAAGTTTCAAGATAAGGAGGTCGCTTGGGTAGAAGATGTGAAATCTTGGGCACACAATGAATATTTAAACATAGTTGCTTCAAAGGAACTTGGGACTGGGGTTGAATCCTTGCAGACTTGTGATCAAGTACTGGCTGACAATGGTCTAAAGAATCATTTGGCAGAAGGAAAGGGTCATGATGATAGGGTTGAAGCCATGACAGCGACTATCACTGAGAATTTACCTTCATCTGATAAAATAATTACTAACAGGGCCACAGTAAGTTTGTTAGATAGAGAGGAACTTTTGGGACTGCATGGGATTGTCAATATTATTGATTGTCCACAAAATGGTACTGCTGTGAATCCTCCTTCATCCATGGAACAAAAATCTGATGGAGGTGCTGTAAATGAACTTTTAGATAGAGAATTAAGACTGAGTAATGGTCCAGATAACAATACCCTTTTGAGTCCACGGAACCAAAATTCTGGAGTCCCATCAAGCATACTTGATGGACATATCCCATCTGTGGAAACACCCGGGATGGTCAATTGTACTGATTGTCCACAGAATGCATCTCCTCTGAATCCCTCATCATCTCTGCTTCAAATATCTGATAAAGGTCCACCAGATGTCCCAAGTTTAGATAGAGCTTTATCACCAACGGCTTGTCAAGCTGCTAGTTCAAGTGATGGTCCAAATACAATTTCCATTTCAAATCCACTTTTGGAGCAACAAAATTCCGACAGAGTCCCTTTGAGTATTCCAACAGCAGCTGATTGTCATGATGATATAGAGCATTTAACAAATGCTGTGTTGGGGGATAAAAGAACCACATCGGATCAGCAAGAAGGAGCACCTAAAACCATGACAGAATTGTCCCAGGGGACTCCAGTATCTAGAACAGTTAATGTCATGGATCCTCCAGAACAAGTGCAGCAATTATCTATAGAGTCCCCTCCCGACCATGATACATCTGAGGAAATGCAGCATTCTTCCGAACAACCTGAACTGATATCTAGTGCAGTTGATGTTGCACCAGCTGATCAATCCAATCATGTTTCACTGATCGTGAAGCCTGTAGAGCAGATGCAACAATTACCATCTGCAGAGCTCCCTTCTCCCCATCTGGATTCAACCAATTTTCCGTTGACAACTGAAGTTGAACATCAGCCAACTGTGGTTCCAAATCAAGAAGTGCAACCCGATTCAAATTTGGAATTTGATTCACATTCACATGAAGTTGCTGTGCACCCTGCCTCAAATTCAGACCCTAATACAGTTACACCTAGTGAAGTAAGAGTGCAATCGGCAGACACAATAAATTTGTCAACTCCTTTGGAGATCAATTATCAACATATGCAAGCTGAAACCCATTCAGCTTCCAGAATGCTGCATTTAAGCTGTGATCCACTTAAAAATGAATTGGATAGAATACAAAAAGTAACAGAACAATCAACGAAAAACTATGAAGATAAGAAATTGCGGTTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGCAGGAAGTACGATATTAAATTTCAAGGAATTGAAGTTGAATTTAAACAAAGAAAGGCGACTCTGGATACAAATCTTAATGTAGTTCATATGAATAAGTTCTTGGCAGATGCTTTTAGGTCTAAATGCACGACTCTTAAACCATCTTGTACATCAGGAATGCTGCCAGATGCAAGTTTTGCACATCAGCAGTTGGTTCAGCCTTCAACAAGACAACAAAGTGCTAGTTGGGCTTCCCTGGTTCCTGGTTCTTCTTCCTGTGGGCCTTCTGCTACCACCAGTGTGCAGAGTCCCTCCACAGCGATTATAAGGGCCGCTGGTTACAGTGCATCAAGATTTTCTCCCAATGTTTCTGCAAGATCACCAATTATCAACACCATCTCTTTGCCAGTTGGAAATCCTCAAGCTGGTGCTCAGAGTCAGATACGAGCCCCTGCACCACATCTCCAGCCCTATAGGCCATCATGA 5997 0.3972 MVNSTRSSHSTKDEENSNRRVTRNSEKEKIKLHPNVSDTTGVRRSPRETPSKKIIPISSSSTRKSVRLEKSAPPAPADKRNSERVEKMMPSPLRRSGRTRSQSSTSYSDSKSSGSLSSNPKPQKEKSVKQLIFEAKEVNANEVHDLETPQVKVKGMTARMYRSLFQLPKEEPNRVDKSNQGGNNGGGKVDECFKERHSDCEEISKNGALPSENGKSKEMRVDTGLSGHVKGLAKNIVILGLLAPSNVAIPSENGKSKEMRVDTGLSGPVKDLVEDTMTLGSLAPSNAATYETGLAPESIHPDYCTEDMLQMLVSSNSILDEDLIRNSVGNDRGEILIPSKSKEITVDVDSNVSAMLAKGDNCNLIPDATSPSRIGGNIMGTDRSSNATIYETGLLPERVQPDCCREESLPSSNSKNGVLPSEDCKAKEMRVDSRLSVPVKDLVENTITLGSLSPSNAATYETGLAPESIQPDYCREKGNSILDEDLIRSNVGHDSSSETLVPSKRMGIMVDMDSDVSATLAKGDNCNLVPDSSSPSQLGANIMGTDGSCSKRIRLDSNPTVSESCIPSATELQDGDYIDESMLQKDSQIGNEKEPGLITNSNSSVTQLNERLSSHIANRSKSDSFRFVEYWVPVQISNLQLEQYCSILLSNASVLRSSSKVDSVGAVRDVLISTRKCCSHPYLVGPELKPSLNKGLEPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVLILFQSIGGSGRVIGNYLEDLLRPRFGSDSYERIDKNLSASKKQAAMKKFNDKNNRRFVFLMETCACVPSIKLSSVDSIIIFDSDWNPMNDIRSLQKITLDSQFELIKIFRLYSSFTVEEKALILSKQCKIFDINLQNTNWSTFHMLLMWGASCLFDELKVFHDGEISASNVKSLFGQPLLKEAMHEFSSLLSKDGEHIDSSNCSILLKVQQNGVAYPGNFSLLGELKFRVLDKEPPQFFWTKLLEGKQFQWKYLNSSSQRNRKKVNLFDGSVNGPNLVNEGAAKKRRKVSNSIVDHPSSKSEDDKLSTGINAGTSGDLLGNVSQFLLSSTTCVGNPFHANYGPYSICLLDQMTDRSQGINVESEKKGRPHDEQRSLHLLMKPEIRKLCDVLLLPDNVKSMADNFLEYVMNNHDVNREPFSILQAFQLSLCWTAASLLKHKLDPIASLIQDMNFECKKEEVDYICSMLRCLKKIFLYRTGNYHDTDSPKASEPSNRAYSCAGVAQEVELFKKDRSKSIKEIQKKCKKKLKKLHLLQEEEKQRLRAAIEEEKAKFEEKYKIESAVIRSCSPNDVTRMEKLRVLNIEYEKGIEELKYQHDTCLKDLEDKQLVEIQKFQDKEVAWVEDVKSWAHNEYLNIVASKELGTGVESLQTCDQVLADNGLKNHLAEGKGHDDRVEAMTATITENLPSSDKIITNRATVSLLDREELLGLHGIVNIIDCPQNGTAVNPPSSMEQKSDGGAVNELLDRELRLSNGPDNNTLLSPRNQNSGVPSSILDGHIPSVETPGMVNCTDCPQNASPLNPSSSLLQISDKGPPDVPSLDRALSPTACQAASSSDGPNTISISNPLLEQQNSDRVPLSIPTAADCHDDIEHLTNAVLGDKRTTSDQQEGAPKTMTELSQGTPVSRTVNVMDPPEQVQQLSIESPPDHDTSEEMQHSSEQPELISSAVDVAPADQSNHVSLIVKPVEQMQQLPSAELPSPHLDSTNFPLTTEVEHQPTVVPNQEVQPDSNLEFDSHSHEVAVHPASNSDPNTVTPSEVRVQSADTINLSTPLEINYQHMQAETHSASRMLHLSCDPLKNELDRIQKVTEQSTKNYEDKKLRLKTDFEKELEELRRKYDIKFQGIEVEFKQRKATLDTNLNVVHMNKFLADAFRSKCTTLKPSCTSGMLPDASFAHQQLVQPSTRQQSASWASLVPGSSSCGPSATTSVQSPSTAIIRAAGYSASRFSPNVSARSPIINTISLPVGNPQAGAQSQIRAPAPHLQPYRPS 1998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1111 1998 Gene3D - 627 857 IPR027417 -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 95 125 - -
Aed1g1111 1998 PANTHER HELICASE PROTEIN MOM1 10 1998 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1013 1033 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1977 1998 - -
Aed1g1111 1998 Coils Coil 1826 1846 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 52 67 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 73 93 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1608 1655 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1481 1501 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1482 1501 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1523 1540 - -
Aed1g1111 1998 Gene3D - 1804 1885 - -
Aed1g1111 1998 PANTHER HELICASE PROTEIN MOM1 10 1998 IPR039322 GO:0031507
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1606 1672 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 8 34 - -
Aed1g1111 1998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 856 IPR027417 -
Aed1g1111 1998 Coils Coil 1247 1286 - -
Aed1g1111 1998 Gene3D - 600 626 IPR038718 -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1523 1583 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 165 190 - -
Aed1g1111 1998 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 714 876 IPR001650 -
Aed1g1111 1998 Pfam Helicase conserved C-terminal domain 712 821 IPR001650 -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1 127 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1556 1583 - -
Aed1g1111 1998 CDD SF2_C_SNF 709 821 - -
Aed1g1111 1998 MobiDBLite consensus disorder prediction 1013 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1111 Aed-Chr1 10931640 10947160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1111 - K11642 gmx:100810773 2899.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1111 1 10931640 10947160 Aed1g1111 1 10931640 10947160 ECH
Aed1g1111 1 10931640 10947160 Aed5g0543 5 3966063 3978199 PCT