LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed5g0528	ATGACTGACTCCGAAAGAGAGTCAGAGTCAGAGGGAGAGATTAGGGCTTCCATCGAACCCGCTTCGGAGGACGCTCCGTCGAGCCCCGGCAGTAGCGGCTACGCCGGCGAAGGTGGAGGCAGCACCAGCGCCACCAGCGGCTCTCAATTTGAAATCGAGCACGTAGAGATAGAAGAGGAAGAGGACACCACCACGATTGAAATCGATAGAATCTCAATTTCCGATTCCCACACTAATTGGATTCCCGGGAAACGCCACTTCGATGAGGATGACGCTTCCCTATCGTGGAGGAAAAGGAAGAAGCATTTCTTCGTTCTCAGTCATTCCGGCAAGCCTATATATTCTAGGTATGGAGATGAACACCGGCTTGCAGGGTTTTCTGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGTGACTCTGTCAAATTGGTGAGGGCTGGAAGGCACCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTTTGCATCAGCTCCACAGAAGAACCTTATGATTCATTAAGGGGACAGTTGGAGCTAATTTATGGTCAGATGCTTGTTATACTAACAAAATCAATAAACAGATGTTTTGAGAAGAATCCAAAATTCGATATGACACCCTTGCTTGGTGGAACAGAATTTGTCTTCTCTTCTCTAATCCACTCTTTCAGCTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCATATGGATCAAGGCAAGCTGCAGGAGCTATATTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTTGTTGGTGCTCAGAAAGCTTCCCTTCATCCTGATGATATGCTGCTGCTGGCCAACTTTGTCATGACGTCAGAATCATTTTCTCCAATTTGCTTGCCAAGATACAATCCTTCAGCATTTTTGGTTCGTGTTGAAACAGTCCTTTTGAAGTCAAGCGTTCTTAGTGAAGTTCAGAGATCCTTGTTAAACGGGGGAATGCATGTTGAGGATCTGCCACCTATACCTCCTTCTGGATCATCTCATTTGGGCCAGCAAATGCTTCCATCAGATTCTCCCGAAAGATTTAAAGAAGCTAATTCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATATCTGGATCAGTATGTCTCTTCAGAATTCCCATCATCAATTAATACGCCTCAGAAGCAGAAAAGACTGTATAGAGCTTATCAGAAGCTTTTTGTATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTCTGCTGGGTGACACAGGATTTTGAGCTCTATGCTACCTTTGATCCCCTTGCAGACAAGGCCTCGGCAATAAAGACTTGCAACCATGAGCTAGCCCCTTTTCATGGTGATTTCCTTACAAATGCTGTAAACATGTACGTATGGGAACTTGTATTTGTGGAGGACACAGCCCATACCATAACTCCATAA	1524	0.4482	MTDSERESESEGEIRASIEPASEDAPSSPGSSGYAGEGGGSTSATSGSQFEIEHVEIEEEEDTTTIEIDRISISDSHTNWIPGKRHFDEDDASLSWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVRAGRHQVVFLVKGPIYLVCISSTEEPYDSLRGQLELIYGQMLVILTKSINRCFEKNPKFDMTPLLGGTEFVFSSLIHSFSWNPATFLHAYTCLPLAYGSRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMTSESFSPICLPRYNPSAFLVRVETVLLKSSVLSEVQRSLLNGGMHVEDLPPIPPSGSSHLGQQMLPSDSPERFKEANSGIGGPAGLWHFIYRSIYLDQYVSSEFPSSINTPQKQKRLYRAYQKLFVSMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYATFDPLADKASAIKTCNHELAPFHGDFLTNAVNMYVWELVFVEDTAHTITP	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed5g0528	507	PANTHER	SAND PROTEIN-RELATED	317	474	IPR004353	GO:0006623
	Aed5g0528	507	PANTHER	BNAC04G15860D PROTEIN	317	474	-	-
	Aed5g0528	507	Pfam	Third Longin domain of FUZ, MON1 and HPS1	382	474	IPR043970	GO:0016192
	Aed5g0528	507	MobiDBLite	consensus disorder prediction	348	372	-	-
	Aed5g0528	507	Pfam	Second Longin domain of FUZ, MON1 and HPS1	262	324	IPR043971	GO:0016192
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	461	474	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	119	139	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	101	118	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	153	167	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	300	323	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	204	216	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	233	254	IPR004353	GO:0006623
	Aed5g0528	507	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	445	459	IPR004353	GO:0006623
	Aed5g0528	507	MobiDBLite	consensus disorder prediction	1	48	-	-
	Aed5g0528	507	MobiDBLite	consensus disorder prediction	24	48	-	-
	Aed5g0528	507	Pfam	First Longin domain of FUZ, MON1 and HPS1	101	221	IPR043972	GO:0016192
	Aed5g0528	507	MobiDBLite	consensus disorder prediction	1	18	-	-
	Aed5g0528	507	PANTHER	BNAC04G15860D PROTEIN	16	316	-	-
	Aed5g0528	507	PANTHER	SAND PROTEIN-RELATED	16	316	IPR004353	GO:0006623

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed5g0528	Aed-Chr5	3794406	3800775	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed5g0528	K20195		-	gmx:100814534	702.975

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed5g0528	5	3794406	3800775	Aed5g0528	5	3794406	3800775	ECH
	Aed1g1124	1	11048926	11056514	Aed5g0528	5	3794406	3800775	PCT