Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1124 ATGAGTTCAGCGGATCGTGATTCCGAGTCCGACCCTCACATCCGACTTCACTTGCCTCCCCTCTCACAGAACCTCTTCGATGATGCCGAACCACCGGAGCTCCAACAACCCAGCGGATCCGACCCCTCCAGCTCTACCAGCAGTATCGCCGCCACAAGCGTTGAAGAGGTCCTTCACCACCAAATTCAGGAGATTACCATCCACGATTCCAACTCTTCCTGGCTTCCCGGAAAACGACATGGTGATGAGGATGATGCTTCCATGTCATGGAGGAAAAGGAAGAAACATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGGTACGGAGACGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAGGCAATCATTTCCTTTGTGGAGAATGGGGGTGACCATGTCAAATTTGTGAGGGCTGGAAAGCACCAGGTGGTTTTTCTCTTAAAAGGACCAATTTATTTAGTCTGCATCAGCTGCACAGAAGAGCCTTATGAGTCATTAAGGGGGCAGTTGGAGCTTATTCATGGTCAGATGATTGTTATACTAACAAAGTCAGTGAACAATTGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACACTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAATCCAGCTACATTTCTTCATTCCTATACTTGTCTACCTCTTGCATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAAAATGTTGCTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACACAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTCTTGGCCAACTTTGTTATGTCATCAGAATCCTTTAGGCAACAAATCATTTGGACTTTGGATTTCTTTGCTTTATGGACTTCGGAAGCATTTTCTCCTGTTTGCTTGCCAAGATACAATGCTTTGGCATTCTTGTATGCTTATATCCACTTTTTTGACGATGACACATACTTGATGTTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATCGAAACGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGTGGGATGCATGTTGAGGATCTACCACCCTTACCTCATTCTGGATCATCTCCTCGTTTGGGCCAGCATAGGCTTCCATTAGATTCTCCTGAAACGGAACCTAATTGTCGCATTGGTGGTGTTGCTGGGTTGTGGCATTTCATATATCGCAGCATTTATCTGGATCAATATATTTCTTCAGAGTTCTCATCACCAATTAACACTCCTAAGCAGCAGAAAAGACTGTATAGAGCTTATCAGAAACTTTTTGCATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAATTTAGAAGGGATGAAAAATACGTTCTTTTCTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGTGTGTCAGTGGGTAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA 1617 0.4335 MSSADRDSESDPHIRLHLPPLSQNLFDDAEPPELQQPSGSDPSSSTSSIAATSVEEVLHHQIQEITIHDSNSSWLPGKRHGDEDDASMSWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKFVRAGKHQVVFLLKGPIYLVCISCTEEPYESLRGQLELIHGQMIVILTKSVNNCFEKNPKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHSYTCLPLAYATRQAAGAILQNVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRQQIIWTLDFFALWTSEAFSPVCLPRYNALAFLYAYIHFFDDDTYLMLLTTSSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMHVEDLPPLPHSGSSPRLGQHRLPLDSPETEPNCRIGGVAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDEKYVLFCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGASPFSW 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1124 538 MobiDBLite consensus disorder prediction 36 51 - -
Aed1g1124 538 MobiDBLite consensus disorder prediction 1 51 - -
Aed1g1124 538 Pfam First Longin domain of FUZ, MON1 and HPS1 95 216 IPR043972 GO:0016192
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 516 536 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 147 161 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 113 133 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 341 367 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 95 112 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 198 210 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 227 248 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 313 336 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 487 501 IPR004353 GO:0006623
Aed1g1124 538 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 503 516 IPR004353 GO:0006623
Aed1g1124 538 Pfam Second Longin domain of FUZ, MON1 and HPS1 256 360 IPR043971 GO:0016192
Aed1g1124 538 Pfam Third Longin domain of FUZ, MON1 and HPS1 424 524 IPR043970 GO:0016192
Aed1g1124 538 PANTHER BNAC04G15860D PROTEIN 48 538 - -
Aed1g1124 538 PANTHER SAND PROTEIN-RELATED 48 538 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1124 Aed-Chr1 11048926 11056514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1124 K20195 - gmx:100816794 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1124 1 11048926 11056514 Aed1g1124 1 11048926 11056514 ECH
Aed1g1124 1 11048926 11056514 Aed5g0528 5 3794406 3800775 PCT