Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0454 ATGACAATGGAATTCCCCACTCTTAAACTTTTCCTTTTCATCTTCTTACTTCTCACACCCACCCATGCAATATCCGCACCCCCCACATCAAACCTATTCCGAGAATACATCGGAGCCGAGTCCAACAACGTTAAATTCTCCGACGTCCCAATCAACCCAAGTGTCGAATTCCACTTCATCCTCTCCTTCGCAATCGACTACGACACCTCATCATCATCACCCTCTCCCACCAACGGAAACTTCAACATCTTCTGGGACACCAACCTGGGCCCCACCCAAGTCTCCGACATCAAAACCAAAAACCCAAACGTCAAAGTTGCCCTAAGCCTCGGAGGAGACACCGTCGGAAACGGCGCCGCCGCTTTCTTCAACCCCACCTCAATCGAATCGTGGGTTTCCAACGCGGTTTCTTCACTCACACACCTCATTAAGGAGTACAACCTAGACGGAATCGACATCGACTACGAGCACTTCAAAGCAGACCCCGAAACATTCTCCGAATGCGTGGGGACGCTAATAAAAACGCTAAAATCCAACGGTGTCATAAAATTCGCGTCGATTGCTCCGTTCGACGACGACCAAGTTCAGAGCCACTACTTGGCCCTTTGGAAGAGCTATGGGAGCCTCATTGATTACGTCAACTTCCAGTTTTACGCGTACGACAAGGGCACGAGCGTGGCTCAGTTCATCGATTACTTCAACACGCAGAGTTCGAATTACAACGGTGGAAAGGTTCTGGTGAGTTTCATCAGTGATGGGAGTGGTGGGTTGGCGCCAAATGGTGGGTTCTTCACAGCGTGTCATACCCTTAAGAGTGAGGGAAAACTTGATGGCATATTTGTTTGGTCTGCTGATGATTCCATGAAAAGTGGTTTCCGCTATGAGAAGCAATCACAAGCACTTTTAGCTATACCCTAG 918 0.4891 MTMEFPTLKLFLFIFLLLTPTHAISAPPTSNLFREYIGAESNNVKFSDVPINPSVEFHFILSFAIDYDTSSSSPSPTNGNFNIFWDTNLGPTQVSDIKTKNPNVKVALSLGGDTVGNGAAAFFNPTSIESWVSNAVSSLTHLIKEYNLDGIDIDYEHFKADPETFSECVGTLIKTLKSNGVIKFASIAPFDDDQVQSHYLALWKSYGSLIDYVNFQFYAYDKGTSVAQFIDYFNTQSSNYNGGKVLVSFISDGSGGLAPNGGFFTACHTLKSEGKLDGIFVWSADDSMKSGFRYEKQSQALLAIP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0454 305 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 148 156 IPR001579 GO:0004553|GO:0005975
Aed5g0454 305 PRINTS 2-S globulin family signature 94 112 IPR000677 -
Aed5g0454 305 PRINTS 2-S globulin family signature 30 43 IPR000677 -
Aed5g0454 305 PRINTS 2-S globulin family signature 265 284 IPR000677 -
Aed5g0454 305 Gene3D Glycosidases 29 304 - -
Aed5g0454 305 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 305 IPR001223 GO:0005975
Aed5g0454 305 SUPERFAMILY (Trans)glycosidases 30 297 IPR017853 -
Aed5g0454 305 CDD GH18_narbonin 32 287 - -
Aed5g0454 305 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 11 303 - -
Aed5g0454 305 PANTHER CHITINASE 2-LIKE 11 303 - -
Aed5g0454 305 Pfam Glycosyl hydrolases family 18 58 222 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0454 Aed-Chr5 3221753 3222670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0454 - - gmx:100810745 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0454 5 3221753 3222670 Aed5g0454 5 3221753 3222670 ECH
Aed1g1172 1 11419895 11420680 Aed5g0454 5 3221753 3222670 PCT