Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1172 ATGTTGTCCATCTTCCGGCAATACACGTTCGACGACTCATTCGAGCAAGTGTTCGTGTCGGAGAAATTCCTGAAGGAGTACCAAATCGCCCTAACCTTCGCCACCGATTACGACGAGGACGGCGTCCCCACCAACGGCTTCTTCCGACCCACGTGGGACACAAGCAAGGTGACCCCCGAATCCATAATGCGCTTCAAGGAGAGGTACGAGAACAAGGTGGACATCAAAGTGTTCATCAGCATCGGCAACCGCGGCACCCAGTTCCCCTTCACCAAACCCCGAGACAACAAAGACTGGATCGCCAACGCCACCGACTCCCTCACGCGCCTCATCAAGTGCGAAGACTACAACCTCCACGTGGACGGCATTGACGTTCTGTACGACCACATCGATGCCTCTCCCGGTGACTTTATCGAGTGCGTGGGACAGCTCATTAGGAACCTCAAGGAATCTGGGGTTGTGAGCGAGGCTTCTATTTCTCCCTCCTATTCTCTCGATGACGACTACTACTCTCGTTTGTACACTAGTTCCAAAATCTCCTCCCTCATTGATTGGGTGGATTACCAGTTCCAAAACGAGAATGCTTTTGTGTCCGACCCCAACATGTTGGTCAAGCGCTACAATGATGTAGCCAAGGTTTATCCCAGAAGGAAACTCTTTGCTGGTTACAGTGCTGAGAACCAGGACTGGACGACGGTGTCTCCCATCATCTTCTTTCTCGCTGGTATGGACATTCTCAAGAAGAGAAGGGCTCCTGGTGTTTCCATTCATTACCATAATTTCTAG 786 0.514 MLSIFRQYTFDDSFEQVFVSEKFLKEYQIALTFATDYDEDGVPTNGFFRPTWDTSKVTPESIMRFKERYENKVDIKVFISIGNRGTQFPFTKPRDNKDWIANATDSLTRLIKCEDYNLHVDGIDVLYDHIDASPGDFIECVGQLIRNLKESGVVSEASISPSYSLDDDYYSRLYTSSKISSLIDWVDYQFQNENAFVSDPNMLVKRYNDVAKVYPRRKLFAGYSAENQDWTTVSPIIFFLAGMDILKKRRAPGVSIHYHNF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1172 261 Pfam Glycosyl hydrolases family 18 62 235 IPR001223 GO:0005975
Aed1g1172 261 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 261 IPR001223 GO:0005975
Aed1g1172 261 PANTHER RUBISCO-ASSOCIATED PROTEIN 1 261 - -
Aed1g1172 261 SUPERFAMILY (Trans)glycosidases 29 257 IPR017853 -
Aed1g1172 261 Gene3D Glycosidases 3 260 - -
Aed1g1172 261 PANTHER CHITINASE 2-LIKE 1 261 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1172 - - gmx:100776259 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1172 1 11419895 11420680 Aed1g1172 1 11419895 11420680 ECH
Aed1g1172 1 11419895 11420680 Aed5g0454 5 3221753 3222670 PCT