Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0446 ATGGAGTTCCTGATCTACCTACTCTACCTGGCTCCAACGTTGTACGCGTGTTTCCTAATCTGGAAGATGTTCGACGAGAGAAGAGACAGAGAGTGCTACATCCTAAACTACCAATGCTACAAGCCCCCCAGCGACCGAATGCTGGGGACCGAGTTCTGCGGCAAGCTCATCCAACGCACCGAAAATCTGGGCCCCAGCGAGTACCGCTTCCTCCTCAAAGCCATCGTCAGCTCCGGCATTGGCGAACAAACCTACGCCCCAAGAAACATCTTCGAGGGCCGTGAGGCCACTCCCACATTGCTCGACGGCATCGCCGAGATGGAAGAGTTCTTCCACGACTCCATCGGAAAACTCCTCTCCAACTCCACCGTCTCCCCCTCCGAGATCGATGTCCTCGTCGTCAACATCTCCATGCTCGCCACCGTCCCCTCTCTCTCCTCGCGAATCATCAATCACTACAAACTCCGCCACGACGTCAAGGTCTACAACCTCACCGGCATGGGCTGCAGCGCCAGCCTCATCTCCATGGACATAGTCAGTAACATCTTCAAGACGCAGCGTAACAAGCTCGCGCTCTTGATCACCTCCGAGTCACTGAGTCCCAATTGGTACACCGGAAGCGACAGATCCATGATTCTAGCTAACTGCCTCTTCCGCTCCGGTGGCTGCGCTATTCTCTTGACCAACAAAAGATCCTTGAAGGACAAGGCCATGCTGAGGCTGAAATGTTTGGTCAGGACACATCACGGCGCCCAAGAAGAAGCCTTTAGCTGCTGTGTTCAGCAGGAAGACGATCAAGGAAGGCTCGGGTTTCACCTTGGGAAGACTCTTCCCAAGTCCGCCACCCGAGCTTTCGTTGATAATCTCCGTGTCATAGCACCCAAGATACTACCTATCCGTGAGTTGCTCAGGTTTATGTTCGCCTCACTAATCCGAAAGATCAACAATAGCAACAATGCTAATCCAAAATCCGTCGGGAGCACCGGAGCTATGAAATCTCCGTTAAACTTCCGAACCGGGGTCGATCATTTTTGCCTTCACACCGGCGGAAAGGCGGTGATCGACGGGATCGGAATGAGCTTGGATCTGAGCGAGTACGACCTGGAACCGGCGAGGATGACGCTGCACCGGTTCGGGAACACGTCAGCGAGTAGCTTGTGGTACGTGTTATCGTACATGGAAGCGAAGAAGAGGCTGAAGAAGGGGGACACGGTGTTCATGATAAGCTTCGGAGCTGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTGATGAAGGACTTGGGGGATGCGAATGTGTGGGAAGATTGCATTGATGAGTATCCACCACACTCATTGGCCAACCCCTTCTTGGAAACCTATGGTTGGATCAATGAAGTTGATGATCCCTACACTTACAAACACCTTCCCGAATTTCTCAAGAAGTGA 1425 0.527 MEFLIYLLYLAPTLYACFLIWKMFDERRDRECYILNYQCYKPPSDRMLGTEFCGKLIQRTENLGPSEYRFLLKAIVSSGIGEQTYAPRNIFEGREATPTLLDGIAEMEEFFHDSIGKLLSNSTVSPSEIDVLVVNISMLATVPSLSSRIINHYKLRHDVKVYNLTGMGCSASLISMDIVSNIFKTQRNKLALLITSESLSPNWYTGSDRSMILANCLFRSGGCAILLTNKRSLKDKAMLRLKCLVRTHHGAQEEAFSCCVQQEDDQGRLGFHLGKTLPKSATRAFVDNLRVIAPKILPIRELLRFMFASLIRKINNSNNANPKSVGSTGAMKSPLNFRTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDANVWEDCIDEYPPHSLANPFLETYGWINEVDDPYTYKHLPEFLKK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0446 474 PANTHER 3-KETOACYL-COA SYNTHASE 1 462 - -
Aed5g0446 474 SUPERFAMILY Thiolase-like 19 232 IPR016039 GO:0016746
Aed5g0446 474 CDD CHS_like 20 421 - -
Aed5g0446 474 PANTHER 3-KETOACYL-COA SYNTHASE 1 462 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed5g0446 474 Pfam FAE1/Type III polyketide synthase-like protein 26 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed5g0446 474 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 341 422 IPR013747 -
Aed5g0446 474 Gene3D - 78 423 IPR016039 GO:0016746
Aed5g0446 474 SUPERFAMILY Thiolase-like 244 424 IPR016039 GO:0016746
Aed5g0446 474 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 455 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0446 Aed-Chr5 3157018 3158442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0446 20 472 Acyl Lipid Metabolism Gene Families AT2G28630 68.831 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0446 K15397 - gmx:100810048 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0446 5 3157018 3158442 Aed5g0446 5 3157018 3158442 ECH
Aed1g1179 1 11468997 11470409 Aed5g0446 5 3157018 3158442 ECH
Aed1g1179 1 11468997 11470409 Aed5g0446 5 3157018 3158442 PCT