Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0432 ATGGAAATTGATCTTTCTCCCCAGCTGGCGAAGAAGGTGTACGAAAGCGATGGTGGGTCTTACCATGCATGGTCCCCTTCGGAGCTTCCCATGTTGCGTGAAGGGAACATTGGTGCTGCCAAACTAGCTCTTCAGAAAAATGGCTTTGCCCTTCCTCGTTACTCTGACTCTGCCAAGGTTGCTTATGTTCTCCAAGGAAGTGGGGTTGTTGGAATTGTGCTCCCTGAAGCAGAAGAGAAGGTTGTTGCAATTAAAAAGGGTGATGCTTTGGCACTCCCTTTTGGTGTGATAACATGGTGGTACAACAAGGAGGACACTGAGTTGGTTGTTCTGTTCTTGGGTGACACTTCAAAAGCCCAAAAAACCGGTGAATTCACTGATTTTTTCCTAACCGGTTCCAATGGAGTCTTCACTGGATTTTCAACTGAGTTTGTGGGAAGAGCTTGGGACTTGGAAGAGAAGGATGTGAAGACCCTTGTTGGGAAACAATCAGGCAAGATTATTGTGAAGCTTGAAGGGAACATCAACATTCCTCAGCCCAAAGAGGATCATAGGAAGGGCATGGCATTGAACTGTGAAGAGGCTCCATTGGATGTTGACATTAAGAATGGTGGAAGGGTTGTGGTTTTGAACACCAAGAACCTTCCCTTGGTTGGTGAGGTTGGTCTTGGAGCAGACCTTGTGAGGCTTGATGGAAAAGCCATGTGTTCTCCTGGATTCTCTTGTGATTCTGCTTTTCAGGTTACTTATATTGTCAGAGGGAGTGGTCGCGCTCAGATTGTTGGTGCTGATGGTCGCAGGGTTTTGGAGGTAACTGTGAAAGCTGGAAACTTGTTCATTGTGCCAAGGTTTTTTGTTGTCTCAAAGATTGCTGACTCTGATGGATTGGAGTGGTTCTCTATCATCACTACCCCCAATCCTGTGTTTACTCACCTGGCTGGAAGCATTTCGGCATGGAAGGCTCTTTCACCAACGGTTCTGCAGGCTGCTTTCAATGTAGATGCAGGAGTTGAGCAACTCTTCCGTTCAAAGAGGAATGCTGATGCCATTTTCTTCCCTCCTCCGAATTAA 1071 0.4659 MEIDLSPQLAKKVYESDGGSYHAWSPSELPMLREGNIGAAKLALQKNGFALPRYSDSAKVAYVLQGSGVVGIVLPEAEEKVVAIKKGDALALPFGVITWWYNKEDTELVVLFLGDTSKAQKTGEFTDFFLTGSNGVFTGFSTEFVGRAWDLEEKDVKTLVGKQSGKIIVKLEGNINIPQPKEDHRKGMALNCEEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGKAMCSPGFSCDSAFQVTYIVRGSGRAQIVGADGRRVLEVTVKAGNLFIVPRFFVVSKIADSDGLEWFSIITTPNPVFTHLAGSISAWKALSPTVLQAAFNVDAGVEQLFRSKRNADAIFFPPPN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0432 356 CDD cupin_11S_legumin_N 4 173 - -
Aed5g0432 356 Gene3D Jelly Rolls 197 356 IPR014710 -
Aed5g0432 356 SUPERFAMILY RmlC-like cupins 12 346 IPR011051 -
Aed5g0432 356 CDD cupin_11S_legumin_C 198 353 - -
Aed5g0432 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Aed5g0432 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Aed5g0432 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Aed5g0432 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Aed5g0432 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Aed5g0432 356 Pfam Cupin 10 156 IPR006045 -
Aed5g0432 356 Pfam Cupin 199 335 IPR006045 -
Aed5g0432 356 PANTHER OS03G0336100 PROTEIN-RELATED 2 346 - -
Aed5g0432 356 PANTHER - 2 346 - -
Aed5g0432 356 SMART Cupin_1_3 195 339 IPR006045 -
Aed5g0432 356 SMART Cupin_1_3 3 157 IPR006045 -
Aed5g0432 356 Gene3D Jelly Rolls 3 196 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0432 Aed-Chr5 3034107 3041857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0432 35 333 Miscellaneous Gene Families AT2G18540 20.344 7.98e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0432 - - gmx:100782055 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0432 5 3034107 3041857 Aed5g0432 5 3034107 3041857 ECH
Aed1g1183 1 11493296 11496032 Aed5g0432 5 3034107 3041857 PCT