Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0412 ATGCCTTCACTTTACATGGGAGATAGGGTGGATAGTTCTAACTCGAGCATGAGTTCTAATTCTAAAGAAAGCAGTGTTGTCACTGGGAAAAACACGTACAAAAAACTTCTGGTTGCATCACGGCCTAAAGGCTTTGCACAGAGAAATTATGAACACCTTGTGTCATTAACCCATGGTGACTTTGGAAGCAGTGCTGTGGGTCGTGCCACATTTTTTCTACTCAAAGTTGCTGTATTAGAGACCGTGAGGAGGTTCTCCAAGAGTAAATGTCCTTGTGTATGGCGAGGCCTGCAGGGTTTACAAATCCTTGTCTATCCACCATTCAAATGGGTTCAGAGAGACTATGGATACATGGATACAGATTTTTTAAAGCTATTCATGCTTTTGGTACTATCAAGACCTCTATTAGTCCTTTCAATTGCGACAGTCTTCACTGATCAACCACAATGTAGTGATGGAACCTCAGATTGTGTTTCTGATTCCCATGATTCTGAAGTTTCTGATGAACTATCTCCTGCAGAGGCTAATTTGAATACAAGTCATTGTGAGATAGATCCTGAAGTTTCAGAATATGAAAGCTTGTTGACTCTACTCAATCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATAAGCTGGCGGGAGAGTTACAGATTTTTTTCAGGTGAAGAGCTGGAAACATGGTCAAATATGGTGTTCTGGCATGGATCTGATTTTTCGCACAGACCTTGCCTCATTGTCAGGCTTGGGATAGCTTGTCGCTCTTTGGCGTCTGAAGATAGACTTCAATTTGCTCAGGCAGTAGAATACGGAGTCTTGCACTTGGTTGATGCAAACAACCCTCAAATTACAGTATTGGTGGACTGTGAAGGGTTATCTCCATTGAGAATTCCTATGAAAATGTTGAGATCTTGTTCCTCCCTTCTGCAAGAGCACTTTCCTAATCGTCTTGGTTGTTTGTTTATCATCCGACTTCCAGCAATTGTTCGTGTTATTGCCCAGACTTTTATTCAGGTTATAAAGCCATCTACTAGGAAGAAGTTGAAGTTAGGGGGAGAGTTATATCGGAAGGTACTTAATGAAAATTTTGAGACACTACCATCATATCTTGGAGGCAGCTGCACTTGCATGAGATGTTCTAAAATTGGCAACTGGGATATGCTGCAACCTCATGCAGCTGGGACCAGCAGAATTGATAGAGAGGATGATATCAGTGACAATAGGAATAGGGGTTTGCCATCACTGCATCAATCTAATGAATTAGATGGCCACGAAATCAGCAATTCCGAGCAGATGTTGAAAACAGCTGTCATAAGTATTATTGTATTTTGGGTTTTCATAGCTCTTGGTGCTGGAATTTACGATCCTGCTAGTCGTCAGTTACCCCCATAA 1479 0.4118 MPSLYMGDRVDSSNSSMSSNSKESSVVTGKNTYKKLLVASRPKGFAQRNYEHLVSLTHGDFGSSAVGRATFFLLKVAVLETVRRFSKSKCPCVWRGLQGLQILVYPPFKWVQRDYGYMDTDFLKLFMLLVLSRPLLVLSIATVFTDQPQCSDGTSDCVSDSHDSEVSDELSPAEANLNTSHCEIDPEVSEYESLLTLLNQELENQGISLPERINDDELHRFYTASNNDFSCFLTSIKKTISWRESYRFFSGEELETWSNMVFWHGSDFSHRPCLIVRLGIACRSLASEDRLQFAQAVEYGVLHLVDANNPQITVLVDCEGLSPLRIPMKMLRSCSSLLQEHFPNRLGCLFIIRLPAIVRVIAQTFIQVIKPSTRKKLKLGGELYRKVLNENFETLPSYLGGSCTCMRCSKIGNWDMLQPHAAGTSRIDREDDISDNRNRGLPSLHQSNELDGHEISNSEQMLKTAVISIIVFWVFIALGAGIYDPASRQLPP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0412 492 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 16 488 - -
Aed5g0412 492 SUPERFAMILY CRAL/TRIO domain 258 406 IPR036865 -
Aed5g0412 492 MobiDBLite consensus disorder prediction 1 26 - -
Aed5g0412 492 SMART sec14_4 255 404 IPR001251 -
Aed5g0412 492 MobiDBLite consensus disorder prediction 8 26 - -
Aed5g0412 492 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 263 407 IPR001251 -
Aed5g0412 492 Gene3D - 188 434 IPR036865 -
Aed5g0412 492 MobiDBLite consensus disorder prediction 425 452 - -
Aed5g0412 492 Pfam CRAL/TRIO domain 259 401 IPR001251 -
Aed5g0412 492 CDD SEC14 252 401 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0412 Aed-Chr5 2924283 2928270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0412 - - gmx:100814843 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1207 1 11646859 11651851 Aed5g0412 5 2924283 2928270 PCT