Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1207 ATGGGAGACACGGTGGATTATTCTGCCTTGAGCAAGATCCCAAAACCAGGCAGTGTCGTGACTGAGAATAAAGCATACAAAATTATGCTAATTGCATCTCATCCTAAAAGTTTTGTACAGAGAAACCATGGACATCTCATTTCACTGATCCGTGGTCACTTTGGAAGTAGAGCTGCGGGTGGTATCACATTTTTTTTTCTTAAAGTTGCTGTTTTAGAGATTATAAGGAGGTTCTCCAAGAGCAGATGCCCATGTGTATGGCGAGGCCTTCAGGCTCTACAAATCCTGTGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCACCCTTCAAGAGTTTGATTGACAGCATGCAGGTCATATCAAGACCATTGCTAGCCCTTTCAATTGCAACATTGTTTTCCGATCTATCAAAATGTAGTGATGGAAAGTCAGATTGTAGTACTGATTCAGAAGATGCAGTAACATACTCAGAATTATCTCCTTTACAGGTTGATTTGAATACAAGCCAGTGTTTGACAGATCCTAAAATTTTAGAATCTGAGAAGTGGTTGACTCAACTCAATCAAGAGCTTGAAAATCAAGGGCTTAGTTTACCAGAAAGGATCAATGATGATGAGCTTCGCAGATTTTATACAGCTTCTAATAATGATTTTTCATGCTTCCTTACCTCAATCAAGAAGGCCATACGATGGCGAGAGACTTACAGAATTCTTTCAGAAGAAGAACTGAAAATGTGGTCAAAAATGGTGTTCTGGCATGGGTACGATGTGGAGCACAGACCTTGCCTAATCGTAAGGCTTGGATTAGCCTGCAGTACATTGACATCTGAAGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATGCAGACAACCCACAGATTACAGTGTTGGTGGATTGTGAAAGGTTCTCTCCAGTGAGAATTCCCATGCAAATAATCAGATCTTGTTCTTCCCTTCTGCAAGACCACTTTCCTAATCGTCTTGGTTGCATGTTTGTCATACGACTGCCAGCCAATGTTCATGTTATTGCCGAGACTTTTATTCAGAGTCAGGAGTTGAAGCCTGCTACTAGAAACAAGTTGAAAATAGAAGGGGAGAAGTATCAGAAAGTTCTTTCTGACTATCTGCCAACACTGCCTTCATATCTTGGAGGCTGCTGCACTTGCATGAAATGCTCCATCATTGGCCAGAGGGGTATGCTGCAAACTTATGCAACTGGGACCAGCAGAAGAGATGGGTTGGAGGATACCAGTGACAGTGACGATGAGGATTCTCCAACATTATTGCATCCTTCCAATGGATTAGAAGGCAACTTATATGGTAATTATGACCAGTTGTTGAGAACTGCTATCGTAGGTATTCTTATATTTTGGGTTCTTATAGCTCTTGGTGCTGTAGTATTTGATCCCAGTAATCGTTACTAG 1458 0.415 MGDTVDYSALSKIPKPGSVVTENKAYKIMLIASHPKSFVQRNHGHLISLIRGHFGSRAAGGITFFFLKVAVLEIIRRFSKSRCPCVWRGLQALQILCYPPFKWIQRWAPFKSLIDSMQVISRPLLALSIATLFSDLSKCSDGKSDCSTDSEDAVTYSELSPLQVDLNTSQCLTDPKILESEKWLTQLNQELENQGLSLPERINDDELRRFYTASNNDFSCFLTSIKKAIRWRETYRILSEEELKMWSKMVFWHGYDVEHRPCLIVRLGLACSTLTSEDRPRFAQAVISQVEYGVLHLVDADNPQITVLVDCERFSPVRIPMQIIRSCSSLLQDHFPNRLGCMFVIRLPANVHVIAETFIQSQELKPATRNKLKIEGEKYQKVLSDYLPTLPSYLGGCCTCMKCSIIGQRGMLQTYATGTSRRDGLEDTSDSDDEDSPTLLHPSNGLEGNLYGNYDQLLRTAIVGILIFWVLIALGAVVFDPSNRY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1207 485 CDD SEC14 240 396 IPR001251 -
Aed1g1207 485 Gene3D - 178 423 IPR036865 -
Aed1g1207 485 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 240 402 IPR001251 -
Aed1g1207 485 SMART sec14_4 244 399 IPR001251 -
Aed1g1207 485 MobiDBLite consensus disorder prediction 419 440 - -
Aed1g1207 485 Pfam CRAL/TRIO domain 247 396 IPR001251 -
Aed1g1207 485 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 16 483 - -
Aed1g1207 485 SUPERFAMILY CRAL/TRIO domain 248 401 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1207 Aed-Chr1 11646859 11651851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1207 - - gmx:100786215 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1207 1 11646859 11651851 Aed1g1207 1 11646859 11651851 ECH
Aed1g1207 1 11646859 11651851 Aed5g0412 5 2924283 2928270 PCT