Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0399 ATGAGCACGCCCTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCTTCAAGGAGAAAATCAAGACTGCTAGATTAGCTCTAACAGATGTCACCGCTGCAGAACTGATGACAGAAGAGGCAACTAGTGGAAATCCATGGGCCCCAGATGCCAGAACTCTCAGATCAATTTCAAGGAATGCTTTTGAGCTAGATGATTATTGGAGGATTGTGGATATTCTGCATAAAAGGTTTCTTAATTTTGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAGCACCTTTTAACTCATGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAGATGTTATTAGCCAGATGAAAGGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTTAGAAAGAAATCTGAGAGGATAATGAAACTGCTGGAAGAAGGGACTCTTCTCAAGGAAGAGAGAAAAAATGCTAGAAGGTTATCTAGAGGGATTGAAGGCTTTGGAAGTTTCTCCCATCGGTCAACTCCGGCGGCACAAGGCGTTCTACGTGAGAGATCATTGCCAACCACACTAAGGAGATGTGACTCAGACTTAAACAACCATCAAGAACATGAAAACCAATCCTCTTGTTCAAGCAATGGCGTGGATGTGGACACAGTAGTAGCAGTCAAATCTCCAAGCCATCAAGGTGGAACTTTCAAGTCCTTGGATGATGATGATGATGATGATGATGATCTTGGCAACAATGAAATGCTTCAGAAATCTGAAACAAGTTCTAAAGAAAACATGAAGCCTAGCAAGGAGGAGTTTCATCTATGGAACTTGAAGGGGGAATCCAAACCACTTTTGGATTGTGGTGAAGAGGATTCCAGGCTTGGAATCATCAGAACAGAAGAAGATCACCCCTTTAATTCAACAGAAATTCATGCCACTTCCTCCTTGCTTTCTGCTTGCTAG 972 0.4187 MSTPLFHEFKKQASFFFKEKIKTARLALTDVTAAELMTEEATSGNPWAPDARTLRSISRNAFELDDYWRIVDILHKRFLNFEKKNWRVSYNSLIVLEHLLTHGPESVAEEFKSDKDVISQMKGFQYIDDTGFNWGLTVRKKSERIMKLLEEGTLLKEERKNARRLSRGIEGFGSFSHRSTPAAQGVLRERSLPTTLRRCDSDLNNHQEHENQSSCSSNGVDVDTVVAVKSPSHQGGTFKSLDDDDDDDDDLGNNEMLQKSETSSKENMKPSKEEFHLWNLKGESKPLLDCGEEDSRLGIIRTEEDHPFNSTEIHATSSLLSAC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0399 323 Gene3D - 28 175 IPR008942 -
Aed5g0399 323 SMART enth_2 32 159 IPR013809 -
Aed5g0399 323 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Aed5g0399 323 MobiDBLite consensus disorder prediction 230 271 - -
Aed5g0399 323 CDD ENTH 34 150 - -
Aed5g0399 323 Pfam ENTH domain 32 153 IPR013809 -
Aed5g0399 323 PANTHER EPSIN/ENT-RELATED 4 322 - -
Aed5g0399 323 PANTHER EPSIN-2-LIKE 4 322 - -
Aed5g0399 323 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0399 Aed-Chr5 2840879 2843329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0399 K12471 - gmx:100811093 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0399 5 2840879 2843329 Aed5g0399 5 2840879 2843329 ECH
Aed1g1218 1 11724090 11725530 Aed5g0399 5 2840879 2843329 PCT