Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1218 ATGGCCACACCTTTGTTCCATGACTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACTGCTAGGTTGGCTCTCACAGATGTTACCCCTGCAGAACTAATGACAGAAGATGCTACAAAAGGAAATCCATGTGCCCCAGATTCTCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTAGATGATTATTTGAGAATAGTAGAAATTCTACACAAAAGACTCCTTCAATTTGACAACAAGAATTGGAGGACCTCTTACAATTCTCTGATTGTGCTGGAGCACCTGTTGACTTATGGACCGGAAAGTGTTGCTGAGGAATTTCAAAAAGACAAAGATGTAATTGACCAAATGAAATACTTGCAGTATATTGATGACACTGGAACGGATATTGAAACTGCTGGAAGAAGGAACTCTCCTCAAGGAAGAAAGAAACCGTGCTCGGAGGTTGTCCAGAGGAATTCAAGACGAAACTCTGACTTCAAAAATAATGAAAATCAGGAAAACCAATGTCTGGACACAGCAGTAGTTAAATCTGGTAGTCCTAGCTATCAGGGTGGAATTTTCAAGAAGTCCCTGGATGATCAGGGAAACATTAAAATGCATCAGAAATCTGAAACAAGCTCTGAAGAAAACATGACACCTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGAGAGTCCAATCCACTTTTGGATGGTAGCCAAGAGAATGATTCAAGACTTGGGATGTTCATAGCCCAAGATGATCACCCCTTTAACCCCACAGAAATGCATCCCACTTCTTCCCTACTTTCTTCCACATGA 819 0.4078 MATPLFHDFKKQASFFLKEKFKTARLALTDVTPAELMTEDATKGNPCAPDSPTLRSISRAAFELDDYLRIVEILHKRLLQFDNKNWRTSYNSLIVLEHLLTYGPESVAEEFQKDKDVIDQMKYLQYIDDTGTDIETAGRRNSPQGRKKPCSEVVQRNSRRNSDFKNNENQENQCLDTAVVKSGSPSYQGGIFKKSLDDQGNIKMHQKSETSSEENMTPSKEEFHLWNLKGESNPLLDGSQENDSRLGMFIAQDDHPFNPTEMHPTSSLLSST 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1218 272 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Aed1g1218 272 MobiDBLite consensus disorder prediction 140 166 - -
Aed1g1218 272 MobiDBLite consensus disorder prediction 133 219 - -
Aed1g1218 272 MobiDBLite consensus disorder prediction 198 219 - -
Aed1g1218 272 Gene3D - 26 170 IPR008942 -
Aed1g1218 272 CDD ENTH 34 133 - -
Aed1g1218 272 PANTHER EPSIN/ENT-RELATED 4 271 - -
Aed1g1218 272 PANTHER EPSIN-2-LIKE 4 271 - -
Aed1g1218 272 SUPERFAMILY ENTH/VHS domain 12 135 IPR008942 -
Aed1g1218 272 MobiDBLite consensus disorder prediction 167 184 - -
Aed1g1218 272 Pfam ENTH domain 32 134 IPR013809 -
Aed1g1218 272 SMART enth_2 32 172 IPR013809 -
Aed1g1218 272 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1218 Aed-Chr1 11724090 11725530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1218 K12471 - gmx:100812797 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1218 1 11724090 11725530 Aed1g1218 1 11724090 11725530 ECH
Aed1g1218 1 11724090 11725530 Aed5g0399 5 2840879 2843329 PCT