Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0393 CCAAAGAGATATTTAGGCTGCAAGTGGAAAGGGCAGATTTGTCCAATTAGGAAATGTGGATTAATTTATGTGGCGAGAACAGAACGGGTTTGGCCTGCTAAATGCGAATTGTGGCGTGGGCTGATGGCCGTGATACAAACGACGGTGCTTGAATTGCCGAGAAGCAACCGCCACGTCAGAATCTCCGCCAAAAGCCACCGCATCTCCGCCAGCTCCGAGCATCGCCCCGAGGGACCCTCCTGCATCTACGTTGGCCCCCTCGAAACCGCCAACAGAGAGAACCTGGAAGCCCTTTATTGCCAAGCACGGGATGCTTACTATAGTGGTCAGCCTCTCATAGTTGATGACATGTTTGATAGAGTAGAGTTAAGGTTGAGATGGTATGGTTCAAAGTCAGTTGTGAAGTATCCTCGGTGCAGTATCAGGAGGCAATCCACATTTGCTGATGCTGAGGAAGATCTGTCTATGGTTTGTGCTTTAGCAAGCACCTGGGCCATGTTCCTTACATTTGGCAGTTTAGCCTGTATTGGACCCATATCATACACTGTTGGCATGGCTTATCAAAATGCATTCGATTCAGGCTTATCAATTGGTAGCCAAACACCCGGACTAGGGTTTCTGGCCTTGGTGAACAGCCTTATTTTCGTTGGGCTGGGTTTTTTCATCGGCTACCCTGTTGCTTCAGCTTCAGCTAAGGTGCTTCAAGGCCTTTGGAGGAATGACTTGGCAGCACTAAAAGGTGCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAACATTGAGTCGCCTCACAGAGCAGATTGTCATGTGTGTGAATGCATATTAGAATTTCGCACAAAAGTCGAGCAAACAGTCTCAAGATTTGGTAGACAGTGGGTTTATGGGCGTATTTATCTTGTTTCACTAAGAGGCAGATCCCGATGCCAATAA 948 0.4747 PKRYLGCKWKGQICPIRKCGLIYVARTERVWPAKCELWRGLMAVIQTTVLELPRSNRHVRISAKSHRISASSEHRPEGPSCIYVGPLETANRENLEALYCQARDAYYSGQPLIVDDMFDRVELRLRWYGSKSVVKYPRCSIRRQSTFADAEEDLSMVCALASTWAMFLTFGSLACIGPISYTVGMAYQNAFDSGLSIGSQTPGLGFLALVNSLIFVGLGFFIGYPVASASAKVLQGLWRNDLAALKGACPNCGEEVFAFVRMDRNIESPHRADCHVCECILEFRTKVEQTVSRFGRQWVYGRIYLVSLRGRSRCQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0393 315 PANTHER PGR5-LIKE A PROTEIN 49 308 - -
Aed5g0393 315 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 49 308 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0393 Aed-Chr5 2800998 2803682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0393 - - gmx:100810752 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0393 5 2800998 2803682 Aed5g0393 5 2800998 2803682 ECH
Aed1g1228 1 11775438 11777135 Aed5g0393 5 2800998 2803682 PCT