Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1228 ATGAAAGTGAAGGTGATGATGAGCATAATACCCAAAATGAGAAGAAGAAGCAAAGGCGTTGCTCTGTTCTCCGTTCGAGCCTGCCACGACCACCCTCATGGCCCATCCTGCATATACGTTGGTCCTCTCCACACCGCCACCAAAGAGACGCTCGAAGCCCTTTACTTTCAGGCACGGGATGCATATTACAGTGGAAAGCCTTTGATACTTGATGACATGTTTGATAGAGTAGAGTTGAAGCTTAAGTGGTATGGTTCCAAGTCAGTTGTCAAGTATCCGAGATGCAGTATCAGGAGACATTCAACATATGCTGATGCTGACGAAGATCTGTCTATGGCTATTGCATTAGCAAGCTTATGGTCCTTATTTCTTGCACTTGGCTGTTCAGCCTGTGTTTGGCCCATGTTGCATACTGTTAGCACAGCTTATCACAAAGCATTGGACTCAGGATTATCATACGGTAGCGAACCATTGGGACTAGGCCTTCTTTTTGTCGTGAATAGCATTATCTTCGTGGCACTGGGTTCGGTCATTGGCTACCCAGTTGCTTCAGCTTCAGTTAAGGTGCTTCAAGGTCTGTGGCGGAATGATTTAGCTGCACTAAAGGGTTCTTGTCCAAATTGTGGAGAAGAGGTATTTGCGTTTGTGAGAACGGACAAGGCCAACAACTCTCCCCATAGAGCAGATTGTCATGTGTGTGAATGCTTATTGGAATTTCGCACCGAAGTTGAGGGAGACAATGGGTTCATGGGCGTATTTACCTTGTTCGCAGATCCAGACGCCAAAGAGAACCGTAAAATTTCTTCGCATCTGGGGGCCTTTGCTTATATGATTGTGAATACTAGTAAGAAATGGATAAAACCAAATTGTGTCCAGTTATTCTTAGTCCAAAACAGTTTTGTTAGAACTCAGAAGCAATCTTGTAACACTTTCATAAAGGAAAGGAAATAA 951 0.4416 MKVKVMMSIIPKMRRRSKGVALFSVRACHDHPHGPSCIYVGPLHTATKETLEALYFQARDAYYSGKPLILDDMFDRVELKLKWYGSKSVVKYPRCSIRRHSTYADADEDLSMAIALASLWSLFLALGCSACVWPMLHTVSTAYHKALDSGLSYGSEPLGLGLLFVVNSIIFVALGSVIGYPVASASVKVLQGLWRNDLAALKGSCPNCGEEVFAFVRTDKANNSPHRADCHVCECLLEFRTEVEGDNGFMGVFTLFADPDAKENRKISSHLGAFAYMIVNTSKKWIKPNCVQLFLVQNSFVRTQKQSCNTFIKERK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1228 316 PANTHER PGR5-LIKE A PROTEIN 15 245 - -
Aed1g1228 316 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 15 245 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1228 Aed-Chr1 11775438 11777135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1228 - - gmx:100791480 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1228 1 11775438 11777135 Aed1g1228 1 11775438 11777135 ECH
Aed1g1228 1 11775438 11777135 Aed5g0393 5 2800998 2803682 PCT