Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0391 ATGGGTAGTCCTCAGAAGAAGAATGAAAGTAAGGGCTTTTTCGCCGCCGTGTCTTCCATGTTCAGCACCGCTCACCGATCAGTCAACGGGCTTCTTGCACATGAAGGTGTAGAAGTCATTAATCCAGAGGGAGGTAAAGAAGATGTGGAGGAGGAAGCTCATAAAGGAAGATGGAAACAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAGCAATATATTGGGTCAGATGTAACATCAATGGTGACACTACCGGTTATTATCTTTGAACCGATGACTATGATTCAGAAAATTGCTGAGATCAAGCTGATGAATCAGAGGATCCATACATGCGCATCATGGGCTATATCGGTGTACTTTGCGTACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTACGAAATGGCTAACCACGGTGGAATTACATTTCTTTCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGCACATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTGACCCTTAAGAGAGATGGTGTAACCCTAGATTTGGTGCCACCTCCTACAAAAGTTAACAACCTCATATTTGGTCGAACTTGGATTGACTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCTGGTCGATATGAAGTGGATGGATATATTTATAATTCTTCCGAGGAGCCTAAAATATTAATGACAGGGAAGTGGAATGAGTCAATGAGTTATCAACCCTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCGGATGTTCCACGGAATGACAAGTTCCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAATTGTTGCCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCTGGGACAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAACCCGAGAGGAAAAAGGGCATAACTTCAAGCCAAGATGGTTTGATTTAACCGAAGAAGTAACAACAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACACTGAACATCGGGCTGCTGCAGATAACTCTGGAAGCATTGATGATGTTGATGTTAAATCAATTGAATTCAATCCATGGCAGTTTGGTAATTTGGCCACGGAATGA 1323 0.421 MGSPQKKNESKGFFAAVSSMFSTAHRSVNGLLAHEGVEVINPEGGKEDVEEEAHKGRWKQEERDGYWKMMQQYIGSDVTSMVTLPVIIFEPMTMIQKIAEIKLMNQRIHTCASWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLSEQVSHHPPMSAAHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVTLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPRNDKFQYTHFAHKINSFDTAPRKLLPSDSRLRPDRYALEMGDLSKSGTEKSSLEERQRAEKRTREEKGHNFKPRWFDLTEEVTTTPWGDLEIYQYNGKYTEHRAAADNSGSIDDVDVKSIEFNPWQFGNLATE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0391 440 MobiDBLite consensus disorder prediction 347 374 - -
Aed5g0391 440 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 437 - -
Aed5g0391 440 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 437 IPR000648 GO:0008289
Aed5g0391 440 Pfam Oxysterol-binding protein 66 410 IPR000648 GO:0008289
Aed5g0391 440 Gene3D - 134 311 - -
Aed5g0391 440 MobiDBLite consensus disorder prediction 355 374 - -
Aed5g0391 440 ProSitePatterns Oxysterol-binding protein family signature. 150 161 IPR018494 -
Aed5g0391 440 Gene3D - 342 434 - -
Aed5g0391 440 SUPERFAMILY Oxysterol-binding protein-like 60 420 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0391 Aed-Chr5 2791451 2796729 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0391 - - gmx:100810228 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0391 5 2791451 2796729 Aed5g0391 5 2791451 2796729 ECH
Aed1g1229 1 11777343 11783038 Aed5g0391 5 2791451 2796729 PCT