Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1229 ATGGGTAGCCCCAAGAAGAATGAAAACACCGGCTTTTTCGCCGCCATGACTTCCAGCTTCTCCGTGTTCGGCAGCGCCATGAACCGATCTGTCAACGGGTTTCTGGGATATGAAGGGGTAGAAGTCATCAATCCGGAGGGTGGTAAAGAGGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAAACCAGAGGAAAGAGATAGTTACTGGAAGATGATGCACAAATATATTGGCTCGGATATAACATCAATGGTAACGCTACCGGTTATTGTTTTTGAACCAATGACTATGATTCAGAAAATGGCAGAGCTATTGGAGTACTCCTACCTGTTAGATCAGGCAGATGAATGTGAGGATCCATACATGCGGCTGGTATATGCATCAACATGGGCTCTAACTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACCTCAAAGCTAAAGACCAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTAACCCTCAAGAGGGATGGTGTAGTCTTAGATTTGGTTCCCCCTCTAACCAAGATTAATAATTTGATATTTGGCCGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAACTTGACAACTGGGGACAAAGTTGTACTATACTTTCAACCATGTGGATGGTTTGGGGCTGGTTGCTATGAAGTAGATGGGTATGTTTATAATTCTGCTGAGGAGCCTAAAATATTGATGACTGGGACGTGGAATGCGTCAATGAGTTTTCAACCTTGTGATTTGGAAGGAGAGCCTCTTCAAGGCACTGAATTGAAAGAGGTTTGGCATGTTGCCGATGTTCCAAAGAATGATAAATTCCAGTATACATACTTTGCACATAAAATAAATAGCTTTGACACTGCTCCTAGAATATTGTTGGCATCAGACTCCCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTATCCAAATCAGGGGCAGAAAAGACCAGTTTGGAGGAGAGGCAACGCGCTGAAAAGAAAATCCGAGAAGCCAAAGAGCATAAATTTACACCAAGATGGTTTGATTTAACTGAAGAAGTGACATCAACTCCTTGGGGTGATTTGGAGACCTATCAATACAATGGTAAATATACTGAGCATCGAGCTGCTATAGATAACTCAGGCAGCACTGATCATGTTGATAATAAAGAAATTGAATTCAATCCATGGCAGTATGGTAATTTTTCCACAGAATGA 1371 0.4267 MGSPKKNENTGFFAAMTSSFSVFGSAMNRSVNGFLGYEGVEVINPEGGKEDAEEEAQRGRWKPEERDSYWKMMHKYIGSDITSMVTLPVIVFEPMTMIQKMAELLEYSYLLDQADECEDPYMRLVYASTWALTVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPLTKINNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGCYEVDGYVYNSAEEPKILMTGTWNASMSFQPCDLEGEPLQGTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAPRILLASDSRLRPDRYALEMGDLSKSGAEKTSLEERQRAEKKIREAKEHKFTPRWFDLTEEVTSTPWGDLETYQYNGKYTEHRAAIDNSGSTDHVDNKEIEFNPWQYGNFSTE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1229 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Aed1g1229 456 Gene3D - 150 327 - -
Aed1g1229 456 SUPERFAMILY Oxysterol-binding protein-like 62 438 IPR037239 -
Aed1g1229 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Aed1g1229 456 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Aed1g1229 456 Gene3D - 358 451 - -
Aed1g1229 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Aed1g1229 456 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1229 Aed-Chr1 11777343 11783038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1229 - - gmx:100779808 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1229 1 11777343 11783038 Aed1g1229 1 11777343 11783038 ECH
Aed1g1229 1 11777343 11783038 Aed5g0391 5 2791451 2796729 PCT